Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AL354798.1-201ENST00000622505 329 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC068620.4-201ENST00000636730 1182 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AP001486.2-201ENST00000561652 5113 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 RNU6-582P-201ENST00000362989 107 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 SNORA51.12-201ENST00000384448 134 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC098592.1-201ENST00000419352 333 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 FTH1P6-201ENST00000430768 320 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC092473.1-201ENST00000441098 221 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 RPS27AP8-201ENST00000452665 445 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 RN7SL323P-201ENST00000494712 295 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 RPL31P61-201ENST00000496160 376 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 OR5BM1P-201ENST00000512021 366 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 RNU6-885P-201ENST00000516607 104 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 HSPE1P5-201ENST00000561489 272 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 MIR5685-201ENST00000579080 79 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC093227.2-201ENST00000589357 285 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AL390816.3-201ENST00000604527 1066 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC124312.4-201ENST00000605533 310 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC131235.4-201ENST00000609288 620 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC121761.2-201ENST00000617300 689 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 MIR6864-201ENST00000617935 70 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 FP236240.3-201ENST00000623061 327 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 AC116618.1-201ENST00000634617 774 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.19□□□□□ -1.74
SNX9Q9Y5X1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 MTND4P34-201ENST00000572715 1371 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 RNU6-1151P-201ENST00000384684 107 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 RNU6-1300P-201ENST00000391046 108 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AL590084.2-201ENST00000401481 382 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AL445189.1-201ENST00000405722 338 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC016907.1-201ENST00000419483 435 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC009237.2-201ENST00000421358 284 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC122718.1-201ENST00000439448 744 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 KATNBL1P3-201ENST00000443475 909 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 MTND2P4-201ENST00000445034 1004 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 FAM133DP-201ENST00000464802 691 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AL139099.1-201ENST00000497398 403 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 RPF2P2-201ENST00000504693 896 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC010587.2-201ENST00000511727 448 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 RNU6-759P-201ENST00000516740 103 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 RNU6-352P-201ENST00000516908 107 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AF279873.1-201ENST00000523393 313 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 OR4A12P-201ENST00000530847 918 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC090616.2-202ENST00000584248 222 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms