Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA1Q9Y5H4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AP002001.2-201ENST00000529025 1469 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 MTND5P1-201ENST00000445440 1375 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 GDI2P1-201ENST00000429312 1336 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 RNU6-730P-201ENST00000383954 104 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 RPS29P4-201ENST00000414733 161 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AL591419.1-201ENST00000427423 339 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 HMGB1P12-201ENST00000438594 598 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC004854.1-201ENST00000440356 349 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 HMGB3P6-201ENST00000444896 598 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 HMGB1P16-201ENST00000447155 540 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 MTCO1P48-201ENST00000448024 1096 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 COX6CP18-201ENST00000448769 222 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AL133162.1-201ENST00000463228 453 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 PPIAP15-201ENST00000479662 484 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC084024.2-201ENST00000503480 791 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC139783.2-201ENST00000504847 1145 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC113420.1-201ENST00000507903 571 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 TPT1P8-201ENST00000510120 555 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 MTCO3P44-201ENST00000510977 541 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC109635.4-202ENST00000531666 412 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 MIR432-201ENST00000606207 94 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AL590282.1-201ENST00000610379 1136 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AL138478.1-201ENST00000612252 832 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC090246.1-201ENST00000616499 426 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC010975.3-201ENST00000618727 978 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 MIR4727-201ENST00000622232 55 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 AC006963.1-201ENST00000624003 1052 ntBASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA1Q9Y5H4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 U1.1-201ENST00000384101 164 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 RNU6-821P-201ENST00000390995 107 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 RNU6-1300P-201ENST00000391046 108 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AMD1P2-201ENST00000412936 992 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 RPS7P15-201ENST00000415804 584 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 MTND2P9-201ENST00000422293 931 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 RPF2P1-201ENST00000424137 906 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 SDCBPP2-201ENST00000424643 885 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 RPL21P66-201ENST00000426566 466 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AP000907.1-201ENST00000428428 510 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 HIGD1AP4-201ENST00000430194 280 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 PRELID3BP10-201ENST00000431957 584 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AL031313.1-201ENST00000448435 256 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AC104978.1-201ENST00000449387 391 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 CFTRP1-201ENST00000456646 183 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 PLGLA-201ENST00000465668 449 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 VN1R17P-201ENST00000472048 1090 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AC069528.1-202ENST00000482888 637 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 RPL21P131-201ENST00000497298 483 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 RNU6-352P-201ENST00000516908 107 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 CYP4A43P-201ENST00000568156 121 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 SNORD84-203ENST00000584275 78 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 OR1S1-201ENST00000624470 978 ntBASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA1Q9Y5H4 U6.105-201ENST00000637379 88 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms