Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC000123.2-201ENST00000623124 461 ntBASIC3.97□□□□□ -1.77
YIPF1Q9Y548 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.97□□□□□ -1.77
YIPF1Q9Y548 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
YIPF1Q9Y548 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.97□□□□□ -1.77
YIPF1Q9Y548 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
YIPF1Q9Y548 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
YIPF1Q9Y548 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.97□□□□□ -1.77
YIPF1Q9Y548 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
YIPF1Q9Y548 AC005539.1-201ENST00000443768 1479 ntBASIC3.97□□□□□ -1.77
YIPF1Q9Y548 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.97□□□□□ -1.77
YIPF1Q9Y548 ZNF542P-204ENST00000482727 1305 ntBASIC3.96□□□□□ -1.77
YIPF1Q9Y548 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.96□□□□□ -1.77
YIPF1Q9Y548 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
YIPF1Q9Y548 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AL160275.2-201ENST00000412010 394 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 ATP5A1P2-201ENST00000412323 255 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 RAP1BP1-201ENST00000412709 553 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC068533.1-201ENST00000418542 415 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 PTP4A1P5-201ENST00000420305 455 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC011233.1-201ENST00000422812 283 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 KCTD9P3-201ENST00000434597 1169 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 HSPD1P21-201ENST00000436541 245 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC013828.1-201ENST00000481845 158 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC018797.3-201ENST00000513388 1241 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 MTCO1P30-201ENST00000515244 580 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 RN7SKP18-201ENST00000516005 275 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC027309.2-201ENST00000520566 192 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC009220.3-201ENST00000604318 586 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC113194.1-201ENST00000606037 500 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC091946.2-201ENST00000606105 291 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC007390.2-201ENST00000606229 3803 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AC084757.4-201ENST00000616350 526 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 AP000676.3-201ENST00000623299 569 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 KPNA2P2-201ENST00000419546 1489 ntBASIC3.96□□□□□ -1.78
YIPF1Q9Y548 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
YIPF1Q9Y548 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 LINC00561-201ENST00000565815 2738 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 RNA5SP387-201ENST00000364226 106 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 Y_RNA.311-201ENST00000365068 96 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 ZNF603P-201ENST00000405613 487 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 CYCSP43-201ENST00000438233 310 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 SNORA71B-202ENST00000439232 272 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 MTATP6P26-201ENST00000445926 662 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 OR6K5P-201ENST00000447050 945 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 RPS3AP46-201ENST00000448352 682 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 NDUFS5P3-201ENST00000450668 321 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 ART2BP-201ENST00000453501 499 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 AC084198.1-201ENST00000477747 402 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 RPS3AP22-201ENST00000488297 769 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 OR4G11P-201ENST00000492842 939 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 AC093534.1-201ENST00000504977 132 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
YIPF1Q9Y548 RNU6-1129P-201ENST00000515964 104 ntBASIC3.95□□□□□ -1.78
YIPF1Q9Y548 DUXAP2-201ENST00000519198 589 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms