Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
PKP3Q9Y446 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PKP3Q9Y446 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PKP3Q9Y446 MTND4P16-201ENST00000466108 1367 ntBASIC4.24□□□□□ -1.73
PKP3Q9Y446 Z73965.1-201ENST00000623412 2297 ntBASIC4.24□□□□□ -1.73
PKP3Q9Y446 Z82217.1-201ENST00000625157 8149 ntBASIC4.24□□□□□ -1.73
PKP3Q9Y446 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PKP3Q9Y446 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.24□□□□□ -1.73
PKP3Q9Y446 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PKP3Q9Y446 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKP3Q9Y446 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKP3Q9Y446 RNU5F-7P-201ENST00000363696 115 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 SNORD116-4-201ENST00000384733 96 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 BTBD10P2-201ENST00000404779 676 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC016397.1-201ENST00000412463 242 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 RPL23AP26-201ENST00000412728 464 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 ZNF885P-201ENST00000420174 1098 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 CYCSP46-201ENST00000423569 204 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AL589823.1-201ENST00000429577 183 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 RPL23AP89-201ENST00000439324 255 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 TRIM60P18-201ENST00000441518 828 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AL162388.1-201ENST00000450912 352 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 RNU7-136P-201ENST00000458819 69 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC079804.1-201ENST00000461922 436 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 HMGB1P21-201ENST00000502313 581 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 BNIP3P41-201ENST00000503774 571 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 OR51K1P-201ENST00000510214 950 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 MTND3P5-201ENST00000512798 333 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 RFPL1S-203ENST00000539579 330 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 CYP4A43P-201ENST00000568156 121 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC141257.3-201ENST00000572906 215 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC119751.7-201ENST00000600494 245 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC128687.1-201ENST00000605304 619 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 MIR6748-201ENST00000610433 71 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PKP3Q9Y446 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 PABPC1P9-201ENST00000426076 1612 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PKP3Q9Y446 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP3Q9Y446 AC068254.2-201ENST00000623938 3577 ntBASIC4.23□□□□□ -1.73
PKP3Q9Y446 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AL121657.1-201ENST00000327215 531 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 MIR383-201ENST00000362257 73 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 Y_RNA.194-201ENST00000363985 102 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 Y_RNA.553-201ENST00000384670 102 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 DHFRP6-201ENST00000401776 268 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC008065.1-201ENST00000428525 348 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 AL512649.1-201ENST00000428997 581 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AL365184.2-201ENST00000431139 435 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 AL353706.1-201ENST00000436728 494 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 BMI1P1-201ENST00000445879 941 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 SNRPGP9-201ENST00000456025 225 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 RNU6-956P-201ENST00000458868 103 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 RPL5P30-201ENST00000465511 891 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 UQCRHP4-201ENST00000471686 272 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AL136126.1-201ENST00000473603 402 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC113430.1-201ENST00000506872 718 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC108475.1-201ENST00000507880 950 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC093809.1-201ENST00000509155 340 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms