Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC008687.2-201ENST00000597865 520 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AP003465.2-201ENST00000602571 373 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC067959.1-201ENST00000604334 379 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC087241.4-201ENST00000612441 480 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC073968.1-201ENST00000618594 637 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC016716.1-201ENST00000265882 708 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AL022722.2-201ENST00000402519 180 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AL445189.1-201ENST00000405722 338 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AL953862.1-201ENST00000423016 168 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC010881.1-201ENST00000433830 235 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 BMS1P19-201ENST00000433925 393 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 LARP1BP3-201ENST00000437229 869 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 HSFY6P-201ENST00000445573 403 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AL592447.1-201ENST00000447592 540 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 IFNWP4-201ENST00000453148 294 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 SRRM1P2-201ENST00000464531 1192 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 RPL30P9-201ENST00000465586 330 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC116347.2-201ENST00000514912 523 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 DEFB109D-201ENST00000529497 240 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC136618.2-201ENST00000575091 400 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 OR6R2P-201ENST00000609216 300 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC231657.1-201ENST00000624313 397 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC027514.1-201ENST00000588561 1603 ntBASIC4.72□□□□□ -1.65
SSX2IPQ9Y2D8 AC105074.1-201ENST00000623380 3095 ntBASIC4.71□□□□□ -1.65
SSX2IPQ9Y2D8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AL592437.2-201ENST00000421655 2434 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 MIR331-201ENST00000362302 94 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-462P-201ENST00000362659 105 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 RNU1-132P-201ENST00000364300 164 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 Y_RNA.359-201ENST00000365498 102 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-444P-201ENST00000383988 108 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-1215P-201ENST00000384441 102 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 PRRC2CP1-201ENST00000404428 159 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC008280.1-201ENST00000418851 412 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC092647.1-201ENST00000420654 287 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 NPM1P24-201ENST00000428039 894 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AL512649.1-201ENST00000428997 581 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 RPL23AP25-201ENST00000430973 463 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC069285.2-201ENST00000440210 275 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC239367.2-201ENST00000447309 705 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 SSXP1-201ENST00000453640 473 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 DNAJC19P1-201ENST00000455312 319 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 RPS27AP17-201ENST00000463344 455 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC091153.1-201ENST00000466297 402 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 RPL35P6-201ENST00000490024 372 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 MTCYBP17-201ENST00000503579 789 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC108475.1-201ENST00000507880 950 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 SOD1P3-201ENST00000518682 454 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 DEFB131D-201ENST00000526803 184 ntBASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX2IPQ9Y2D8 OR6C7P-201ENST00000547875 934 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms