Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC021755.1-201ENST00000559747 1447 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 PABPC1P7-201ENST00000413177 1513 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 MIR148B-201ENST00000362252 99 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 AC012498.1-201ENST00000424037 437 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 ETF1P3-201ENST00000430422 1160 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 HMGB3P11-201ENST00000440127 604 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 Z99714.1-201ENST00000450463 807 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 RPS4XP10-201ENST00000465034 731 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 AP002884.2-201ENST00000471647 395 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 AC092185.1-201ENST00000491371 97 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 AC021678.1-201ENST00000505195 936 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 RNU6-1073P-201ENST00000517182 106 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 RPL12P22-201ENST00000519073 490 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 HIGD1AP1-201ENST00000550979 275 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 AC007566.2-201ENST00000603642 413 ntBASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTNNA3Q9UI47 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 RNU1-70P-201ENST00000362618 164 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 SNORA48.5-201ENST00000391143 135 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 TAF9BP1-201ENST00000396646 746 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 FAR1P1-201ENST00000427163 934 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 CST9LP2-201ENST00000437612 320 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 FTH1P25-201ENST00000447665 469 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 Z99127.3-201ENST00000448158 395 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 HMGN1P18-201ENST00000457642 277 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AC104027.1-201ENST00000521887 300 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 C1DP5-201ENST00000525775 383 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AC004024.1-201ENST00000549244 247 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AC012414.2-201ENST00000559474 187 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AC005242.1-201ENST00000585658 438 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AC092326.2-201ENST00000624772 1561 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 AC073476.4-201ENST00000628409 72 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 U6.107-201ENST00000637108 79 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 SRP72P2-201ENST00000344851 1979 ntBASIC3.91□□□□□ -1.78
CTNNA3Q9UI47 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.9□□□□□ -1.78
CTNNA3Q9UI47 AP001350.1-201ENST00000601906 1524 ntBASIC3.9□□□□□ -1.78
CTNNA3Q9UI47 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTNNA3Q9UI47 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CTNNA3Q9UI47 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTNNA3Q9UI47 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AL583834.1-201ENST00000406943 343 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 RNA5SP107-201ENST00000411358 122 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 UBE2V1P1-201ENST00000430836 445 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 RPL7P52-201ENST00000449200 742 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 RPL23AP15-201ENST00000450202 459 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 RNU6-775P-201ENST00000459318 96 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC110794.1-201ENST00000505816 425 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC010198.2-201ENST00000550612 259 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC027807.1-201ENST00000559921 996 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 MIR4504-201ENST00000577413 92 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC012493.2-201ENST00000595083 291 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 CKS1BP3-201ENST00000600888 237 ntBASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTNNA3Q9UI47 MTND4P34-201ENST00000572715 1371 ntBASIC3.89□□□□□ -1.79
CTNNA3Q9UI47 AC009501.3-201ENST00000605001 1352 ntBASIC3.89□□□□□ -1.79
CTNNA3Q9UI47 RNU6-40P-201ENST00000384254 107 ntBASIC3.89□□□□□ -1.79
CTNNA3Q9UI47 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CTNNA3Q9UI47 AL121972.1-201ENST00000402023 252 ntBASIC3.89□□□□□ -1.79
CTNNA3Q9UI47 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.89□□□□□ -1.79
CTNNA3Q9UI47 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CTNNA3Q9UI47 RNA5SP229-201ENST00000410809 99 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms