Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHD7Q9P2D1 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CHD7Q9P2D1 RNA5SP88-201ENST00000365560 109 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 U8.13-201ENST00000390842 128 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHD7Q9P2D1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHD7Q9P2D1 AL662791.1-201ENST00000441992 928 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHD7Q9P2D1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHD7Q9P2D1 AL591416.1-201ENST00000404015 867 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 RN7SKP32-201ENST00000410167 303 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 RN7SKP140-201ENST00000411196 284 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 AC068587.2-201ENST00000478386 781 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 RPL23AP70-201ENST00000483361 460 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.56□□□□□ -2
CHD7Q9P2D1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CHD7Q9P2D1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC2.56□□□□□ -2
CHD7Q9P2D1 TTC39DP-201ENST00000416781 1688 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHD7Q9P2D1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHD7Q9P2D1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.56□□□□□ -2
CHD7Q9P2D1 RNU4-44P-201ENST00000363050 141 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 RPL31P1-201ENST00000398116 372 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 AC007677.1-201ENST00000445757 515 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 AC118282.1-201ENST00000506408 765 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.56□□□□□ -2
CHD7Q9P2D1 AC093673.2-201ENST00000609674 331 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 AL162233.1-201ENST00000620014 944 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 USP8P1-201ENST00000494673 3183 ntBASIC2.56□□□□□ -2
CHD7Q9P2D1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.55□□□□□ -2
CHD7Q9P2D1 AC022031.1-201ENST00000585985 2593 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 NPM1P10-201ENST00000398310 865 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 OR6C64P-201ENST00000419708 825 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.55□□□□□ -2
CHD7Q9P2D1 RPL23AP11-201ENST00000475260 469 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.55□□□□□ -2
CHD7Q9P2D1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.55□□□□□ -2
CHD7Q9P2D1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 AL353743.4-201ENST00000422653 1547 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 Y_RNA.269-201ENST00000364685 89 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.55□□□□□ -2
CHD7Q9P2D1 SETP15-201ENST00000412724 337 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 RPL23AP36-201ENST00000413895 458 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 AC245291.1-201ENST00000419501 328 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.55□□□□□ -2
CHD7Q9P2D1 RPL23AP49-201ENST00000492925 468 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 RNA5SP281-201ENST00000516504 135 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 RN7SKP219-201ENST00000516825 296 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 HMGN2P47-201ENST00000559378 272 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.55□□□□□ -2
CHD7Q9P2D1 MIR6845-201ENST00000613182 61 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 CRYM-AS1-204ENST00000637983 556 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHD7Q9P2D1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.55□□□□□ -2
CHD7Q9P2D1 GABPAP-201ENST00000419271 1356 ntBASIC2.55□□□□□ -2
CHD7Q9P2D1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CHD7Q9P2D1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.55□□□□□ -2
CHD7Q9P2D1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.55□□□□□ -2
CHD7Q9P2D1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.55□□□□□ -2
CHD7Q9P2D1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.55□□□□□ -2
CHD7Q9P2D1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.55□□□□□ -2
CHD7Q9P2D1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.55□□□□□ -2
CHD7Q9P2D1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHD7Q9P2D1 Z73965.1-201ENST00000623412 2297 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CHD7Q9P2D1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CHD7Q9P2D1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.54□□□□□ -2
CHD7Q9P2D1 TRIM60P18-201ENST00000441518 828 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 ST13P20-201ENST00000447996 1065 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.54□□□□□ -2
CHD7Q9P2D1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 AC026464.5-201ENST00000562497 722 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 AC061975.8-201ENST00000587058 721 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 AC104237.2-201ENST00000612456 443 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 AC110994.2-201ENST00000635481 492 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 AC091564.4-201ENST00000533934 2194 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CHD7Q9P2D1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHD7Q9P2D1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHD7Q9P2D1 RNA5SP456-201ENST00000364002 114 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 Y_RNA.338-201ENST00000365320 114 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHD7Q9P2D1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.54□□□□□ -2
CHD7Q9P2D1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.54□□□□□ -2
CHD7Q9P2D1 NPM1P49-201ENST00000448027 714 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.54□□□□□ -2
CHD7Q9P2D1 RANP3-201ENST00000530970 276 ntBASIC2.54□□□□□ -2
CHD7Q9P2D1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.54□□□□□ -2
CHD7Q9P2D1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms