Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AL049779.3-201ENST00000557141 606 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 LARP7P2-201ENST00000575306 125 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC027229.1-201ENST00000583887 253 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 HMGB2P1-201ENST00000591146 634 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC124916.2-201ENST00000604416 224 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 U6.114-201ENST00000636407 96 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC232271.1-201ENST00000602455 2715 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC002525.1-201ENST00000624392 1622 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC244517.1-201ENST00000606030 2086 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RN7SKP69-201ENST00000365390 305 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RNY3P13-201ENST00000365542 102 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RN7SKP81-201ENST00000365603 331 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RNU6-641P-201ENST00000384006 107 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.464-201ENST00000384282 110 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 EIF5P1-201ENST00000400019 1231 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 GCNT1P4-201ENST00000404096 329 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RNA5SP251-201ENST00000410614 137 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RN7SKP235-201ENST00000410662 305 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 NMD3P2-201ENST00000421815 761 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AL138785.1-201ENST00000425821 331 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC236972.1-201ENST00000433225 199 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RPL23AP43-201ENST00000446445 471 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 DEFB109F-201ENST00000491870 277 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC114801.2-201ENST00000503825 781 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC009901.1-201ENST00000506703 541 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC010343.2-201ENST00000510162 224 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RNU6-189P-201ENST00000516120 101 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.715-201ENST00000517082 110 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RNU6-111P-201ENST00000517179 105 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 RNU1-54P-201ENST00000517181 120 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC027308.1-201ENST00000517993 110 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 HSBP1P1-201ENST00000555205 166 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 HMGB3P26-201ENST00000560051 582 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 MIR3189-201ENST00000578735 73 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 MIR3614-201ENST00000581261 86 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 MIR4420-201ENST00000583944 77 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AL031176.1-201ENST00000604554 466 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 SAGE2P-201ENST00000420011 2126 ntBASIC6.04□□□□□ -1.44
CUEDC1Q9NWM3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 DHX40P1-201ENST00000588725 1412 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.376-201ENST00000365638 108 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 SNORA70H-201ENST00000383910 135 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 SNORA70J-201ENST00000384182 135 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.485-201ENST00000384395 102 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 MIR433-201ENST00000384837 93 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms