Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 RPS3AP23-202ENST00000574601 686 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 CKS1BP3-201ENST00000600888 237 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC005191.1-201ENST00000603950 358 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 BNIP3P10-201ENST00000605360 577 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC055876.5-201ENST00000605667 259 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 PART1_1.1-201ENST00000611761 217 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 CASC19-204ENST00000641001 2055 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 GNG5P1-201ENST00000255500 204 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 Y_RNA.142-201ENST00000363491 102 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 SNORD115.1-201ENST00000391109 76 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 FAT1P1-201ENST00000406588 507 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 RN7SKP266-201ENST00000410232 287 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AL359704.1-201ENST00000411586 781 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 RAD23BP1-201ENST00000421404 1227 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AL589872.1-201ENST00000426602 288 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 RPL35AP21-201ENST00000437667 333 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 SDCBPP1-201ENST00000440192 890 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 RPS5P7-201ENST00000456664 608 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC245028.2-201ENST00000458673 253 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 UBA52P3-201ENST00000491303 382 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 RPL21P129-201ENST00000491732 478 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC117522.3-201ENST00000507974 584 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC105031.1-201ENST00000518550 476 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AP005639.2-201ENST00000527592 928 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC068831.4-201ENST00000556118 109 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC007224.1-201ENST00000564410 144 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AL359999.1-201ENST00000604513 294 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 FAM27B-201ENST00000610601 213 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 AL732618.1-201ENST00000623251 301 ntBASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM7Q9NR12 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.4□□□□□ -1.55
PDLIM7Q9NR12 AC006484.1-201ENST00000435086 1884 ntBASIC5.4□□□□□ -1.55
PDLIM7Q9NR12 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM7Q9NR12 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM7Q9NR12 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM7Q9NR12 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AP000473.2-201ENST00000602659 1537 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AC104118.1-201ENST00000607625 1589 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 Y_RNA.86-201ENST00000363020 111 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 RNU6-146P-201ENST00000384602 108 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AL603766.1-201ENST00000407763 664 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 RPL22P17-201ENST00000438729 315 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 RPL17P49-201ENST00000443728 411 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 BTF3P6-201ENST00000448054 499 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AL591623.2-201ENST00000449978 222 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms