Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 CYCSP30-201ENST00000546447 172 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 HSPE1P3-201ENST00000559254 309 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 FAM60BP-201ENST00000578364 658 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 AC245036.5-201ENST00000596330 847 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 AC244505.7-201ENST00000599675 272 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 AC004987.4-201ENST00000603383 338 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 AC112220.2-201ENST00000605513 533 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 AC106028.5-201ENST00000610332 395 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 AC002076.2-201ENST00000617362 122 ntBASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4AQ9BY43 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC097714.1-201ENST00000511272 1647 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AL645937.1-201ENST00000641739 1652 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 RNU5D-1-201ENST00000363299 116 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 RNU6-213P-201ENST00000384051 104 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 RPS15AP38-201ENST00000413110 372 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AL672167.3-201ENST00000465951 960 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 FTH1P2-201ENST00000466086 412 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC114981.1-201ENST00000503897 678 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 IGHV3-76-201ENST00000522465 295 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC073387.2-201ENST00000604797 784 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 MIR6500-201ENST00000622700 86 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 AC103988.1-201ENST00000566382 2177 ntBASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4AQ9BY43 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 OR5H2-201ENST00000355273 945 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 RN7SKP280-201ENST00000364196 304 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 RNU4-51P-201ENST00000364206 140 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 RNU6-224P-201ENST00000384055 107 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 RNU4-6P-201ENST00000410804 122 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AC009237.5-201ENST00000414271 501 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 TPTE2P3-201ENST00000441562 1189 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AC026410.2-201ENST00000460281 156 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AC007599.1-201ENST00000568688 1174 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AC120057.2-201ENST00000571520 271 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 AL365503.1-201ENST00000605247 905 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 U6.101-201ENST00000637707 76 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 CUL1P1-201ENST00000509510 2425 ntBASIC5.11□□□□□ -1.59
CHMP4AQ9BY43 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 RNU6-1155P-201ENST00000363554 107 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 RPL7P30-201ENST00000420888 709 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms