Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 AC011460.1-201ENST00000636268 1834 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 LARP1BP1-201ENST00000506036 1359 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 MTCO1P9-201ENST00000505577 1534 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC073343.1-201ENST00000328239 651 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 SNORA4.3-201ENST00000365564 137 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 MIR589-201ENST00000385238 99 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 SNORA48.4-201ENST00000391089 134 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 MIR937-201ENST00000401271 86 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AL109941.1-201ENST00000401925 229 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 RNU6-193P-201ENST00000410977 107 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC069218.2-201ENST00000411665 344 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AL451054.2-201ENST00000420896 202 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AL031736.2-201ENST00000426573 787 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 RPL7AP49-201ENST00000429522 581 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AL591438.1-201ENST00000433508 581 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 ERLEC1P1-201ENST00000433806 578 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 RPS20P5-201ENST00000434808 360 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AL138799.3-201ENST00000438968 350 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 FHP1-201ENST00000442741 703 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 MTND3P16-201ENST00000452205 344 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC130509.1-201ENST00000464158 433 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 NDUFB5P1-201ENST00000508134 564 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 RN7SKP256-201ENST00000517201 314 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC024224.1-201ENST00000538284 609 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 RPL21P12-201ENST00000559810 515 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 UBE2L4-201ENST00000587688 464 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC011626.1-201ENST00000604710 562 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC116312.1-201ENST00000606841 314 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 OR6R2P-201ENST00000609216 300 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC093799.2-201ENST00000610062 578 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 AP001284.1-201ENST00000528393 2118 ntBASIC5.2□□□□□ -1.58
HDAC8Q9BY41 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC8Q9BY41 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 SMG1P7-201ENST00000565246 2704 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 RNA5SP258-201ENST00000362750 119 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 Y_RNA.100-201ENST00000363141 102 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 Y_RNA.128-201ENST00000363391 112 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 Y_RNA.259-201ENST00000364619 101 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 Y_RNA.367-201ENST00000365544 101 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 Y_RNA.422-201ENST00000384054 114 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 RNU6-1293P-201ENST00000384077 107 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 RNU11-201ENST00000387069 134 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 MIR550A3-201ENST00000390735 95 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 SNORA75.4-201ENST00000391278 119 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 RPL26P29-201ENST00000415623 438 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 BX276092.6-201ENST00000430476 250 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 OR4K11P-201ENST00000431829 904 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 UBE2V1P13-201ENST00000436983 439 ntBASIC5.19□□□□□ -1.58
HDAC8Q9BY41 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC8Q9BY41 AC104073.1-201ENST00000451988 151 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms