Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.08□□□□□ -1.44
USB1Q9BQ65 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 BTBD10P1-201ENST00000549824 1352 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AP001284.1-201ENST00000528393 2118 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 RPL23AP22-201ENST00000437556 453 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 RN7SL390P-201ENST00000470634 284 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC074198.2-201ENST00000508153 258 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 RFPL4AP5-201ENST00000514977 504 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 snoU109.6-201ENST00000516831 118 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 AF186190.1-201ENST00000517470 480 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 IGHVII-53-1-201ENST00000519538 255 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC093023.1-201ENST00000547375 507 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC136932.1-201ENST00000574771 208 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC005951.2-201ENST00000576282 495 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 MIR15A-201ENST00000607334 83 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 U1.41-201ENST00000617626 165 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 AL138693.1-201ENST00000622219 129 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 PROS2P-201ENST00000474651 1951 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AP001148.1-201ENST00000624124 2359 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USB1Q9BQ65 AC092747.4-201ENST00000620519 1861 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 IQCB2P-201ENST00000401788 1633 ntBASIC6.07□□□□□ -1.44
USB1Q9BQ65 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 LINC02555-201ENST00000563933 1951 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 RNA5SP382-201ENST00000363355 112 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 RNY1P5-201ENST00000383890 115 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 RN7SKP86-201ENST00000410454 332 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 AC133134.1-201ENST00000466800 359 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 MRPS5P3-201ENST00000515577 166 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 AC093878.1-201ENST00000515630 432 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 AC091144.1-201ENST00000519573 138 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 AC092121.1-201ENST00000569452 202 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 MIR4433B-201ENST00000581329 102 ntBASIC6.06□□□□□ -1.44
USB1Q9BQ65 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USB1Q9BQ65 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USB1Q9BQ65 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 AC062029.1-202ENST00000606164 3651 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 MSL3P1-202ENST00000440028 1468 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 RNU6-595P-201ENST00000363944 107 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 RN7SKP191-201ENST00000364713 306 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 SNORD94-201ENST00000386037 137 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms