Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 POLR2J4-204ENST00000418424 324 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AC090281.1-201ENST00000523019 276 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AL391156.1-201ENST00000554965 554 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AC020895.1-201ENST00000595362 272 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AC007621.1-201ENST00000604544 437 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AL359715.4-201ENST00000606629 1436 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AP000942.1-201ENST00000463969 747 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AP004247.3-201ENST00000608682 624 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 AL353705.4-201ENST00000449661 238 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 MIR2114-201ENST00000516645 80 ntBASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 MTND5P19-201ENST00000424872 1794 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 RNU6-295P-201ENST00000516901 104 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AP000919.1-202ENST00000581139 1264 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 MTCO3P21-201ENST00000430791 643 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 SNORA64.4-201ENST00000516632 81 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 MIR6845-201ENST00000613182 61 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AC095038.3-201ENST00000634439 195 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 AL359893.1-201ENST00000447628 1580 ntBASIC2.17□□□□□ -2.06
CSMD1Q96PZ7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 FAM35BP-202ENST00000497389 3337 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC106872.3-201ENST00000495104 446 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 CEACAMP4-201ENST00000457676 421 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC003982.1-202ENST00000469928 248 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC106872.2-201ENST00000494303 480 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 RN7SKP234-201ENST00000517173 224 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AP003385.6-201ENST00000531603 374 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC023813.4-201ENST00000607580 580 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC008121.2-201ENST00000614647 523 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 YPEL5P1-201ENST00000419731 367 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC004801.2-202ENST00000463559 283 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 OR5AK3P-201ENST00000527486 1297 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC006272.2-201ENST00000594725 163 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC007423.1-201ENST00000605009 627 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC008277.2-201ENST00000605196 797 ntBASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CSMD1Q96PZ7 AC090229.1-201ENST00000590983 1609 ntBASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 AL359511.1-201ENST00000402970 211 ntBASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 RN7SKP58-201ENST00000411010 305 ntBASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 AC107398.1-201ENST00000486904 505 ntBASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 AC092045.1-201ENST00000495716 1231 ntBASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 MTND4P10-201ENST00000446199 1363 ntBASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
CSMD1Q96PZ7 AC096644.4-201ENST00000563417 2912 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 AL365396.1-201ENST00000430854 671 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 RPL21P41-201ENST00000459863 264 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 RN7SL636P-201ENST00000497504 294 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms