Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RPL7P9-201ENST00000468715 747 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 ST13P14-201ENST00000474095 734 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 RPL7P24-201ENST00000493052 752 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC096751.1-202ENST00000502691 1067 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC006499.2-201ENST00000513470 337 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 RN7SKP289-201ENST00000517244 295 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 SETP7-201ENST00000552169 453 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC012669.1-201ENST00000603209 283 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AL163642.2-201ENST00000604722 1019 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AL672296.1-201ENST00000427780 2158 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AF127577.6-201ENST00000623352 2191 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC006504.1-201ENST00000562493 3666 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 SNORA72.3-201ENST00000365074 132 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 RPS27AP7-201ENST00000422792 455 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 DUTP6-201ENST00000425573 462 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 BTF3P10-201ENST00000433415 495 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 ARPC3P5-201ENST00000448802 534 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 RPL7P52-201ENST00000449200 742 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 RPL12P26-201ENST00000452430 487 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 HMGB1P15-201ENST00000453854 435 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 MTCO3P20-201ENST00000454926 688 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 RN7SL93P-201ENST00000463035 293 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 MTCYBP17-201ENST00000503579 789 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 COX7A2P2-201ENST00000505291 250 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC004062.1-201ENST00000509926 645 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 XKRY-201ENST00000510392 1100 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC021146.1-201ENST00000511202 716 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 MTCO2P32-201ENST00000514865 403 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AC009712.1-201ENST00000564938 316 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AL365503.1-201ENST00000605247 905 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AL590240.3-201ENST00000621416 943 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AL356585.4-201ENST00000623078 1229 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 AL645937.1-201ENST00000641739 1652 ntBASIC3.81□□□□□ -1.8
VPS33AQ96AX1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS33AQ96AX1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 TAF9BP1-201ENST00000396646 746 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 RNU4-25P-201ENST00000410569 230 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC009237.5-201ENST00000414271 501 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 MTATP6P27-201ENST00000416987 621 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC127526.1-201ENST00000417526 366 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 RPL7P30-201ENST00000420888 709 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AL590233.1-201ENST00000430017 456 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 ATP5F1P1-201ENST00000433775 569 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AL138878.2-201ENST00000440581 1241 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 HSPE1P28-201ENST00000443139 211 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC005297.2-201ENST00000450430 606 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 Z82190.1-201ENST00000454534 490 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 MTCO3P11-201ENST00000455103 774 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 DNAJC19P1-201ENST00000455312 319 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AP001992.1-205ENST00000462248 379 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC011276.1-201ENST00000469688 323 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 RPL7P47-201ENST00000497299 556 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms