Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.2□□□□□ -1.58
ERCC4Q92889 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.2□□□□□ -1.58
ERCC4Q92889 AC124864.2-201ENST00000624736 186 ntBASIC5.2□□□□□ -1.58
ERCC4Q92889 AC097504.1-201ENST00000515103 2415 ntBASIC5.2□□□□□ -1.58
ERCC4Q92889 EOGT-210ENST00000615922 1931 ntBASIC5.2□□□□□ -1.58
ERCC4Q92889 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.2□□□□□ -1.58
ERCC4Q92889 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.2□□□□□ -1.58
ERCC4Q92889 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC4Q92889 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.2□□□□□ -1.58
ERCC4Q92889 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC4Q92889 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC4Q92889 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ERCC4Q92889 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ERCC4Q92889 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ERCC4Q92889 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.2□□□□□ -1.58
ERCC4Q92889 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
ERCC4Q92889 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
ERCC4Q92889 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ERCC4Q92889 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ERCC4Q92889 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ERCC4Q92889 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
ERCC4Q92889 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ERCC4Q92889 OR11H4-201ENST00000315409 1082 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 RNU6-769P-201ENST00000384407 104 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 Y_RNA.608-201ENST00000410647 95 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AL591848.1-201ENST00000413092 322 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC009480.2-201ENST00000422916 432 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AL445669.1-201ENST00000426743 755 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 MTCO2P19-201ENST00000427513 598 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC239809.1-201ENST00000450470 217 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 SBDSP1-204ENST00000453858 737 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 MTCO3P2-201ENST00000457365 171 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC090142.1-201ENST00000465776 462 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC026412.2-201ENST00000512270 1075 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 RNU6-314P-201ENST00000516574 104 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AC104986.1-201ENST00000517978 436 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AP001922.4-201ENST00000526967 290 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC110743.1-201ENST00000584870 478 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AC009977.1-201ENST00000586015 570 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.19□□□□□ -1.58
ERCC4Q92889 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 SLC25A36P1-201ENST00000590111 465 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 AC073091.2-201ENST00000603205 907 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 BNIP3P11-201ENST00000603878 563 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
ERCC4Q92889 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.19□□□□□ -1.58
ERCC4Q92889 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 FAM157B-203ENST00000639350 358 ntBASIC5.19□□□□□ -1.58
ERCC4Q92889 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ERCC4Q92889 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ERCC4Q92889 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
ERCC4Q92889 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.19□□□□□ -1.58
ERCC4Q92889 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
ERCC4Q92889 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
ERCC4Q92889 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
ERCC4Q92889 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.18□□□□□ -1.58
ERCC4Q92889 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 INTS6P1-201ENST00000504674 2530 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 RNA5SP502-201ENST00000362694 119 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 Y_RNA.256-201ENST00000364594 104 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 Y_RNA.303-201ENST00000364998 94 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 SNORA51.8-201ENST00000384234 132 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 RNU6-146P-201ENST00000384602 108 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 SNORD115.1-201ENST00000391109 76 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 MIR937-201ENST00000401271 86 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AC245052.5-201ENST00000416320 649 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 RPL21P91-201ENST00000429231 479 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 RPL12P46-201ENST00000436610 195 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 RSU1P2-202ENST00000437884 485 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 MTND6P13-201ENST00000443510 523 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms