Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LINC01560Q8TB33 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LINC01560Q8TB33 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC008885.1-201ENST00000514930 301 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 RN7SKP96-201ENST00000516948 297 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 RN7SKP234-201ENST00000517173 224 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC009812.2-201ENST00000517657 457 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AF279873.1-201ENST00000523393 313 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AP002404.1-201ENST00000532005 451 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC092851.1-201ENST00000535964 478 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC093510.2-201ENST00000562820 896 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 MTND4LP25-201ENST00000570218 163 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 MIR2682-201ENST00000580305 110 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC124283.4-201ENST00000581815 456 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC006504.3-201ENST00000586818 523 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AC091488.1-201ENST00000604239 660 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LINC01560Q8TB33 AL133412.1-201ENST00000380194 2992 ntBASIC2.79□□□□□ -1.96
LINC01560Q8TB33 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC009487.2-201ENST00000420969 6821 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AP002784.2-201ENST00000397300 549 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 RNU6-77P-201ENST00000410554 91 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 RPS15AP40-201ENST00000419621 391 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AL513174.1-201ENST00000423182 629 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC008065.1-201ENST00000428525 348 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 UBE2V1P6-201ENST00000430840 422 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 BX248409.1-201ENST00000455497 255 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 RNU6-416P-201ENST00000516265 103 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 IGJP1-201ENST00000522682 475 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 SERPINE4P-201ENST00000554978 281 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 MIR4738-201ENST00000579134 87 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 MIR4298-201ENST00000584380 73 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 VN1R88P-201ENST00000596787 292 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC112503.2-201ENST00000609005 552 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AP005229.2-201ENST00000609980 697 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC105429.2-201ENST00000610567 517 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC084824.5-201ENST00000612009 413 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 MIR7106-201ENST00000612419 65 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AC105227.2-201ENST00000615075 605 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 SNORD39.4-201ENST00000620099 78 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 AL109659.3-201ENST00000624985 950 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01560Q8TB33 ZNF849P-201ENST00000594711 1566 ntBASIC2.78□□□□□ -1.96
LINC01560Q8TB33 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 MTCO1P6-201ENST00000481192 1384 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 DCAF13P1-201ENST00000495256 1330 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 OR1S2-201ENST00000302592 978 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 RN7SKP44-201ENST00000363602 316 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 RNA5SP322-201ENST00000363617 119 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 SNORA5B-201ENST00000363786 132 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 SNORA51.12-201ENST00000384448 134 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 MIR153-1-201ENST00000384914 90 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 RNU6-272P-201ENST00000411028 104 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 PAICSP7-201ENST00000419829 962 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01560Q8TB33 AC012065.2-201ENST00000421295 375 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 AC246680.2-201ENST00000422106 389 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 DEFB130D-201ENST00000426866 237 ntBASIC2.77□□□□□ -1.97
LINC01560Q8TB33 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms