Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AC010591.1-201ENST00000603941 649 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AC115621.1-201ENST00000604653 858 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AC015813.4-201ENST00000610469 179 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AL450489.1-201ENST00000612071 468 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AC069209.1-201ENST00000619282 651 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AC067852.7-201ENST00000623270 535 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 MIR4278-201ENST00000636094 69 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AC068620.4-201ENST00000636730 1182 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AC244258.1-201ENST00000637553 1071 ntBASIC2.95□□□□□ -1.94
LINC01006Q8NI28 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LINC01006Q8NI28 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MIR448-201ENST00000362131 111 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 RNU6-492P-201ENST00000363035 104 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 Y_RNA.169-201ENST00000363745 96 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 SUGT1P1-201ENST00000379514 476 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 RNU6-657P-201ENST00000383904 107 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 RNVU1-14-201ENST00000384770 164 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC006960.1-201ENST00000419980 153 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 PTP4A1P5-201ENST00000420305 455 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MTCO3P1-205ENST00000422088 832 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC011233.1-201ENST00000422812 283 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 IFNNP1-201ENST00000429219 553 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC005345.1-201ENST00000431868 217 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 RPS17P13-201ENST00000448974 407 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC073387.1-201ENST00000453261 709 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC010307.1-201ENST00000467206 836 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL358832.1-201ENST00000497800 389 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC026427.2-201ENST00000506228 536 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC010587.2-201ENST00000511727 448 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 RNU6-488P-201ENST00000515918 99 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AP001189.2-201ENST00000527320 189 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AP000790.1-201ENST00000528891 737 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 TRAV15-201ENST00000556680 249 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC093519.1-201ENST00000566109 298 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MIR3200-201ENST00000580767 85 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC022069.1-201ENST00000582910 658 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 SNORD39.3-201ENST00000584451 71 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC020914.6-201ENST00000594327 272 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 SNORA62.6-201ENST00000606322 83 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC004908.3-201ENST00000610248 625 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL359535.1-201ENST00000612100 1087 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC131159.1-201ENST00000621854 213 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AP000676.3-201ENST00000623299 569 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC007490.1-201ENST00000624321 703 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC079416.3-201ENST00000624479 549 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MIR6715B-201ENST00000637172 77 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AL392088.2-201ENST00000637607 285 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MKKS-204ENST00000639674 192 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC119674.1-207ENST00000641355 633 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms