Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RNU4-21P-201ENST00000362802 126 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 Y_RNA.77-201ENST00000362962 107 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RNU6-878P-201ENST00000384578 110 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 MIR659-201ENST00000384963 97 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 MT-TC-201ENST00000387405 66 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RPS3AP26-201ENST00000398259 784 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RPS16P5-201ENST00000406501 404 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 MIR320C1-201ENST00000408566 88 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RPS23P10-201ENST00000416185 486 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RBMY1KP-201ENST00000423480 476 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 EIF1P3-201ENST00000423841 334 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 PRELID3BP10-201ENST00000431957 584 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 CKS1BP5-201ENST00000434172 273 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AL512286.1-201ENST00000439244 400 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 UBE2V1P3-201ENST00000439651 417 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RPL23AP33-201ENST00000442301 452 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 TAF9P1-201ENST00000445421 515 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC002381.1-201ENST00000447049 280 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 RPL29P29-201ENST00000448725 423 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 PPIAP3-201ENST00000450588 505 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 TAF9P2-201ENST00000454958 515 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC053481.1-201ENST00000467217 306 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC017015.1-201ENST00000477387 286 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 HMGB1P36-201ENST00000487709 576 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC006499.5-201ENST00000505037 514 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 TMEM248P1-201ENST00000510579 951 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 MTND5P4-201ENST00000514978 288 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 IFITM8P-201ENST00000522529 394 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 COX6CP8-201ENST00000522620 226 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 PHBP17-201ENST00000528576 541 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC092851.1-201ENST00000535964 478 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC024224.1-201ENST00000538284 609 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC135279.1-201ENST00000543493 504 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 OR6C7P-201ENST00000547875 934 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 CENPUP2-201ENST00000555897 1186 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 BBIP1P1-201ENST00000602999 279 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 U73023.1-201ENST00000603134 700 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC008782.1-201ENST00000603386 430 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AL160290.3-201ENST00000604869 165 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC097468.3-201ENST00000607956 456 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC020634.1-201ENST00000608701 549 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC015813.4-201ENST00000610469 179 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC100827.5-201ENST00000615883 426 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AL445264.1-201ENST00000621719 171 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 IQCB2P-201ENST00000401788 1633 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 PABPC1P9-201ENST00000426076 1612 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AC008725.1-201ENST00000605123 2263 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 AC079741.1-201ENST00000321498 212 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 RNU6-501P-201ENST00000364072 100 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 Y_RNA.318-201ENST00000365131 97 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 MIR513A2-201ENST00000385249 127 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 AC069213.2-201ENST00000420238 366 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 FAR2P4-202ENST00000425399 584 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 AL590233.1-201ENST00000430017 456 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 AC011998.1-201ENST00000433403 117 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 THAP5P1-201ENST00000439089 262 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 TRIM60P18-201ENST00000441518 828 ntBASIC3.78□□□□□ -1.8
CSNK2A3Q8NEV1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms