Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.42□□□□□ -1.86
RTL9Q8NET4 AP000873.1-201ENST00000463987 400 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.42□□□□□ -1.86
RTL9Q8NET4 AC003982.1-202ENST00000469928 248 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.42□□□□□ -1.86
RTL9Q8NET4 OR8X1P-201ENST00000534542 869 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 EIF5A2P1-201ENST00000564027 460 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 VN1R84P-201ENST00000593697 235 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 AC009039.2-201ENST00000624524 529 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.42□□□□□ -1.86
RTL9Q8NET4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.42□□□□□ -1.86
RTL9Q8NET4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.42□□□□□ -1.86
RTL9Q8NET4 AC092593.1-201ENST00000515413 1815 ntBASIC3.42□□□□□ -1.86
RTL9Q8NET4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
RTL9Q8NET4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RTL9Q8NET4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RTL9Q8NET4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RTL9Q8NET4 MIR26A1-201ENST00000362205 77 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTL9Q8NET4 BMS1P22-201ENST00000414726 313 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL9Q8NET4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL9Q8NET4 RAB9AP5-201ENST00000437794 597 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 RAB9AP2-201ENST00000443911 597 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 RPS20P32-201ENST00000456044 356 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 AC090525.1-201ENST00000479116 478 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 AC104687.1-201ENST00000485829 412 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 AC012170.1-201ENST00000495139 359 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL9Q8NET4 COX6B1P6-201ENST00000522347 255 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 MIR4716-201ENST00000579628 84 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 AC010200.2-201ENST00000605098 235 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL9Q8NET4 AC087241.4-201ENST00000612441 480 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RTL9Q8NET4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL9Q8NET4 TAB3P1-202ENST00000452645 1634 ntBASIC3.41□□□□□ -1.86
RTL9Q8NET4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.41□□□□□ -1.86
RTL9Q8NET4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RTL9Q8NET4 RNA5SP167-201ENST00000365461 116 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RTL9Q8NET4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.4□□□□□ -1.86
RTL9Q8NET4 NEK4P1-201ENST00000433383 879 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 RPL21P112-201ENST00000434403 463 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 MTND2P2-201ENST00000434633 945 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 UBE2V2P1-201ENST00000434717 398 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 AL513328.1-201ENST00000446460 224 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 TRBV12-1-201ENST00000479785 344 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.4□□□□□ -1.86
RTL9Q8NET4 HPRT1P3-201ENST00000539521 576 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 TRAV37-201ENST00000553906 342 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.4□□□□□ -1.86
RTL9Q8NET4 AC026790.2-201ENST00000606282 430 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 Z99129.2-201ENST00000619967 314 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 AL359757.2-201ENST00000624309 274 ntBASIC3.4□□□□□ -1.86
RTL9Q8NET4 AC108206.1-201ENST00000570186 4159 ntBASIC3.4□□□□□ -1.87
RTL9Q8NET4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTL9Q8NET4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.4□□□□□ -1.87
RTL9Q8NET4 AC004987.3-201ENST00000413879 771 ntBASIC3.39□□□□□ -1.87
RTL9Q8NET4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.39□□□□□ -1.87
RTL9Q8NET4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.39□□□□□ -1.87
RTL9Q8NET4 AL138799.3-201ENST00000438968 350 ntBASIC3.39□□□□□ -1.87
RTL9Q8NET4 RPL21P41-201ENST00000459863 264 ntBASIC3.39□□□□□ -1.87
RTL9Q8NET4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.39□□□□□ -1.87
RTL9Q8NET4 SMARCE1P4-201ENST00000523647 241 ntBASIC3.39□□□□□ -1.87
RTL9Q8NET4 NPM1P35-201ENST00000533043 868 ntBASIC3.39□□□□□ -1.87
RTL9Q8NET4 AC112503.1-201ENST00000608436 391 ntBASIC3.39□□□□□ -1.87
RTL9Q8NET4 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
RTL9Q8NET4 AL139811.1-201ENST00000424779 2299 ntBASIC3.39□□□□□ -1.87
RTL9Q8NET4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.39□□□□□ -1.87
RTL9Q8NET4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RTL9Q8NET4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.39□□□□□ -1.87
RTL9Q8NET4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RTL9Q8NET4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTL9Q8NET4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTL9Q8NET4 RNU2-37P-201ENST00000410695 177 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.38□□□□□ -1.87
RTL9Q8NET4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.38□□□□□ -1.87
RTL9Q8NET4 AC112220.1-201ENST00000434628 355 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 RPS29P6-201ENST00000438196 145 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 AL592437.1-201ENST00000443781 492 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 AC078817.1-201ENST00000492623 435 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 RNA5SP282-201ENST00000516355 108 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 IGHV3-76-201ENST00000522465 295 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 AC055876.1-202ENST00000567053 138 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.38□□□□□ -1.87
RTL9Q8NET4 AC104763.2-201ENST00000604179 382 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 AC107294.3-201ENST00000609211 526 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 AC009318.3-201ENST00000616916 503 ntBASIC3.38□□□□□ -1.87
RTL9Q8NET4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTL9Q8NET4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTL9Q8NET4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTL9Q8NET4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTL9Q8NET4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RTL9Q8NET4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.38□□□□□ -1.87
RTL9Q8NET4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTL9Q8NET4 MIR124-3-201ENST00000384866 87 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms