Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AL133384.1-201ENST00000412744 351 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 BOLA3P4-201ENST00000418151 400 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC006548.1-201ENST00000427470 102 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC017083.1-201ENST00000428093 483 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 MTCYBP15-201ENST00000433123 1127 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 ATP5HP2-201ENST00000433885 485 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC073063.1-201ENST00000434352 607 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AL590103.1-201ENST00000434488 307 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 HMGB1P16-201ENST00000447155 540 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 HMGB3P22-202ENST00000451823 572 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 SNORD105B-201ENST00000458770 79 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 RPS29P2-201ENST00000479278 136 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC004062.1-201ENST00000509926 645 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 RNA5SP208-201ENST00000516156 78 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC010591.1-201ENST00000603941 649 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 HMGB1P50-201ENST00000605814 607 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC120053.1-201ENST00000607706 736 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AL512506.2-201ENST00000624472 458 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC092184.1-201ENST00000625042 715 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 CR381572.1-201ENST00000625098 102 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC119674.1-207ENST00000641355 633 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 AC111188.2-201ENST00000529697 1387 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 MAPK10-373ENST00000641983 6772 ntBASIC3.75□□□□□ -1.81
HDDC3Q8N4P3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 SNORD82-201ENST00000365530 70 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 SNORD116-23-201ENST00000384645 92 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC096664.2-201ENST00000411843 406 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 DBF4P1-201ENST00000412976 1892 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AIMP1P1-201ENST00000418670 937 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC087650.1-201ENST00000431445 468 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC127537.2-201ENST00000439258 465 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 BX510359.1-201ENST00000456973 237 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC084198.1-201ENST00000477747 402 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AP000790.1-201ENST00000528891 737 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AL121603.1-201ENST00000553815 142 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC090877.1-201ENST00000561418 344 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AL360157.1-201ENST00000565962 87 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 MTND4LP25-201ENST00000570218 163 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 MRPS35P3-201ENST00000603189 709 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AL137849.1-201ENST00000604767 169 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC006329.2-201ENST00000611491 394 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC008759.3-201ENST00000613300 508 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC018926.1-201ENST00000616335 435 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC009318.4-201ENST00000620496 486 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 MIR3651-201ENST00000630427 90 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AC139713.2-210ENST00000641741 992 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 CEP170P1-201ENST00000502249 4587 ntBASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDDC3Q8N4P3 AL672296.1-201ENST00000427780 2158 ntBASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 RNU6-839P-201ENST00000363347 108 ntBASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 RNA5SP424-201ENST00000390988 115 ntBASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 AC092638.1-201ENST00000411966 1275 ntBASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 FCF1P2-201ENST00000415284 583 ntBASIC3.73□□□□□ -1.81
HDDC3Q8N4P3 AC007390.1-201ENST00000415722 356 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms