Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 AC002076.2-201ENST00000617362 122 ntBASIC3.89□□□□□ -1.79
VPS8Q8N3P4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 AC009501.3-201ENST00000605001 1352 ntBASIC3.89□□□□□ -1.79
VPS8Q8N3P4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS8Q8N3P4 EI24P2-201ENST00000397776 1076 ntBASIC3.88□□□□□ -1.79
VPS8Q8N3P4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS8Q8N3P4 AIMP1P1-201ENST00000418670 937 ntBASIC3.88□□□□□ -1.79
VPS8Q8N3P4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS8Q8N3P4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS8Q8N3P4 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.88□□□□□ -1.79
VPS8Q8N3P4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS8Q8N3P4 MTND5P23-201ENST00000430812 1655 ntBASIC3.88□□□□□ -1.79
VPS8Q8N3P4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.88□□□□□ -1.79
VPS8Q8N3P4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS8Q8N3P4 AL445529.1-201ENST00000398713 389 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AC239798.3-201ENST00000454459 408 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 VN1R17P-201ENST00000472048 1090 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AC093755.1-201ENST00000512950 1023 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AP003122.3-201ENST00000526316 255 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AP001646.1-201ENST00000527936 915 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 ELOCP31-201ENST00000540463 467 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AC022069.1-201ENST00000582910 658 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 OOSP1P1-201ENST00000423265 274 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 NDUFS5P3-201ENST00000450668 321 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 SNORA31.1-201ENST00000515993 133 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 SNORA31.5-201ENST00000516190 133 ntBASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS8Q8N3P4 AC069528.2-201ENST00000624849 1991 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 BX005019.1-201ENST00000561881 1810 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 AL139413.1-201ENST00000421309 217 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 MYL8P-204ENST00000431574 518 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 RPL21P71-201ENST00000465598 459 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 CBX3P5-201ENST00000552017 521 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 CKS1BP1-201ENST00000555221 240 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 AC079228.1-201ENST00000624774 1049 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 AC010149.2-201ENST00000637608 315 ntBASIC3.86□□□□□ -1.79
VPS8Q8N3P4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS8Q8N3P4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS8Q8N3P4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS8Q8N3P4 MTND5P12-201ENST00000502851 1449 ntBASIC3.85□□□□□ -1.79
VPS8Q8N3P4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
VPS8Q8N3P4 MIR142-201ENST00000384835 87 ntBASIC3.85□□□□□ -1.79
VPS8Q8N3P4 FTH1P6-201ENST00000430768 320 ntBASIC3.85□□□□□ -1.79
VPS8Q8N3P4 RPL32P28-201ENST00000443577 397 ntBASIC3.85□□□□□ -1.79
VPS8Q8N3P4 AC068305.1-201ENST00000497406 726 ntBASIC3.85□□□□□ -1.79
VPS8Q8N3P4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS8Q8N3P4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS8Q8N3P4 AC007423.1-201ENST00000605009 627 ntBASIC3.85□□□□□ -1.79
VPS8Q8N3P4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS8Q8N3P4 MIR1291-201ENST00000627649 87 ntBASIC3.85□□□□□ -1.79
VPS8Q8N3P4 LRRC77P-213ENST00000637727 880 ntBASIC3.85□□□□□ -1.79
VPS8Q8N3P4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 AC093909.5-201ENST00000621839 1799 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 RLIMP2-201ENST00000427891 1563 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 RNA5SP344-201ENST00000411081 104 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 MTCO2P17-201ENST00000424336 677 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 NANOGP5-201ENST00000424456 877 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 RPL23AP45-201ENST00000476406 468 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 AC010486.1-201ENST00000511793 424 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 AC068446.3-201ENST00000555285 382 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 RPL23AP84-201ENST00000571193 464 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms