Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 EIF2AP4-201ENST00000424793 1781 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 Y_RNA.188-201ENST00000363952 111 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-190P-201ENST00000384154 102 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 Y_RNA.556-201ENST00000384677 113 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC004386.1-201ENST00000393214 761 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC110754.1-201ENST00000399740 601 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 U3.43-201ENST00000410734 213 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RPL21P109-201ENST00000422213 475 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC008267.5-201ENST00000424928 265 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC236972.1-201ENST00000433225 199 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AL445928.1-201ENST00000435545 222 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AL359672.1-201ENST00000442302 409 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 PFN1P11-201ENST00000445829 389 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RPL7AP71-201ENST00000451120 739 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC117503.1-201ENST00000472241 394 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC098818.1-201ENST00000478593 252 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC012123.2-201ENST00000485809 248 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 PGAM1P13-201ENST00000507497 754 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RN7SKP196-201ENST00000516267 345 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-1332P-201ENST00000516666 104 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-307P-201ENST00000516743 106 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-677P-201ENST00000516914 101 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 IGKV1D-22-201ENST00000518953 324 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-323P-201ENST00000521915 107 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AL049779.3-201ENST00000557141 606 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AL442067.1-201ENST00000613261 223 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC068213.1-201ENST00000625124 226 ntBASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DEPDC4Q8N2C3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 SNORD62.1-201ENST00000362541 86 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 RNU1-146P-201ENST00000364015 165 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-293P-201ENST00000411259 106 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 Z99755.1-201ENST00000414048 380 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AL359092.1-201ENST00000417156 265 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC099677.1-201ENST00000420575 175 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 USMG5P1-201ENST00000425964 177 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC073410.1-201ENST00000435125 589 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 NEFMP1-201ENST00000443423 1006 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 IGHV5-78-201ENST00000450948 295 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 YWHAEP1-201ENST00000453697 763 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AL445687.2-201ENST00000458156 728 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC104472.2-201ENST00000469035 601 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC103987.1-201ENST00000473394 348 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 RPL31P60-201ENST00000478450 367 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 SNORD116-26-201ENST00000516006 96 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AP001284.1-201ENST00000528393 2118 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC026371.1-201ENST00000551867 419 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 MIR4732-201ENST00000581873 76 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms