Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL389915.1-201ENST00000422463 466 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RAC1P8-201ENST00000427086 527 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 Z93242.1-201ENST00000427102 353 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 MTCO1P3-201ENST00000429327 192 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 ATP5JP1-201ENST00000431631 322 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 B3GNT2P1-201ENST00000434960 952 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC092641.1-201ENST00000440229 772 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC004854.1-201ENST00000440356 349 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 Z77249.1-201ENST00000444622 1175 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 COX6CP18-201ENST00000448769 222 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 PDSS1P2-201ENST00000449397 678 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RNU7-170P-201ENST00000459303 61 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RN7SL594P-201ENST00000470590 287 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC113420.1-201ENST00000507903 571 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL121576.1-201ENST00000556055 276 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 MIR5047-201ENST00000579212 100 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 U3.45-201ENST00000607547 219 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RMST_8.1-201ENST00000610287 165 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL592295.2-201ENST00000612578 206 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL357559.1-201ENST00000622228 274 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL157770.1-201ENST00000623049 439 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 OR4G3P-201ENST00000633500 913 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL392088.2-201ENST00000637607 285 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC009452.1-201ENST00000640823 606 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC106754.1-201ENST00000562632 1513 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 SNORA70E-201ENST00000384492 135 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AL121978.1-201ENST00000402778 359 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AL133264.1-201ENST00000407157 562 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 RN7SKP285-201ENST00000410137 318 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC073264.1-201ENST00000411508 416 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC069218.2-201ENST00000411665 344 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 RPS3AP9-201ENST00000417027 792 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC106883.1-201ENST00000418805 562 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 MTND2P9-201ENST00000422293 931 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 RPF2P1-201ENST00000424137 906 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 MTCO2P23-201ENST00000425216 680 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 OR51AB1P-201ENST00000429046 620 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 PSMA2P3-201ENST00000429685 675 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 HMGB3P6-201ENST00000444896 598 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AL031313.1-201ENST00000448435 256 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 TVP23BP2-201ENST00000455082 615 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 U3.44-201ENST00000458938 192 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 RPL21P103-201ENST00000479921 488 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 RPL21P131-201ENST00000497298 483 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC110768.1-201ENST00000509222 400 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AP006245.1-201ENST00000522549 120 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 OR10V3P-201ENST00000525712 725 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 CCNG2P1-201ENST00000549521 1000 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 YWHAQP7-201ENST00000603536 658 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 MIR92B-201ENST00000607575 96 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 MIR7851-201ENST00000610611 160 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 RNVU1-4-201ENST00000612985 164 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AL392048.1-201ENST00000613946 534 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC010975.3-201ENST00000618727 978 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC092628.2-201ENST00000622492 339 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 AC098679.5-201ENST00000624394 571 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms