Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC010201.1-201ENST00000605051 540 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AL592436.1-201ENST00000605135 558 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC048344.4-201ENST00000619744 527 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 MIR7154-201ENST00000620673 73 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC103706.2-201ENST00000638080 240 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 ARF4P3-201ENST00000397387 509 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 RPS15AP38-201ENST00000413110 372 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 MTCYBP24-201ENST00000420387 1106 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC012065.2-201ENST00000421295 375 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AL035407.1-201ENST00000429211 571 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 RPS3AP12-201ENST00000443616 753 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC010469.1-201ENST00000463864 576 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC097493.1-201ENST00000463958 372 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC012158.1-204ENST00000483430 465 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 RNA5SP216-201ENST00000516111 123 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 RN7SKP116-201ENST00000516902 319 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC026403.1-201ENST00000518938 295 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 HSPA8P13-201ENST00000523715 472 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC239860.2-201ENST00000525886 270 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC100770.1-201ENST00000532310 322 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 RPL23AP97-201ENST00000568955 471 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC025811.1-201ENST00000604312 472 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AL354976.1-201ENST00000613843 387 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC090116.1-201ENST00000615679 446 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC073968.1-201ENST00000618594 637 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 MTND2P41-201ENST00000637599 773 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 AC009093.8-201ENST00000641769 292 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 MTND4P34-201ENST00000572715 1371 ntBASIC4.48□□□□□ -1.69
HERC6Q8IVU3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HERC6Q8IVU3 ZNF542P-204ENST00000482727 1305 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC116667.1-201ENST00000604855 2072 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 MTND5P3-201ENST00000438536 1800 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 SNORD82-201ENST00000365530 70 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 RNU6-878P-201ENST00000384578 110 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 ATP5F1P4-201ENST00000397288 746 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 RSL24D1P4-201ENST00000400938 484 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 SNORA57.3-201ENST00000411095 141 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 MTCYBP38-201ENST00000417160 1123 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AL022400.1-201ENST00000423946 935 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC005517.2-201ENST00000424673 553 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC091286.1-201ENST00000431233 461 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 PABPC1P3-201ENST00000469174 459 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC087312.1-201ENST00000471411 480 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 RPS3AP22-201ENST00000488297 769 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC012170.1-201ENST00000495139 359 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC104685.1-201ENST00000502445 371 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC108078.3-201ENST00000502633 489 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC108941.1-201ENST00000502853 530 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC090151.1-201ENST00000520784 730 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 DEFB131D-201ENST00000526803 184 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms