Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 FABP12P1-201ENST00000401911 322 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 RPS3AP9-201ENST00000417027 792 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 DEFB130D-201ENST00000426866 237 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 CDC42P1-201ENST00000456658 548 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 ARPC3P2-201ENST00000457786 533 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 MTND4LP22-201ENST00000508209 276 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 IGKV2D-36-201ENST00000518643 226 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 HMGB1P1-201ENST00000522557 636 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 NIFKP8-201ENST00000560500 874 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AC005951.1-201ENST00000576706 485 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 MIR4789-201ENST00000577469 82 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 MIR3160-1-201ENST00000577972 85 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AC022916.3-201ENST00000592961 742 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AC099676.1-201ENST00000608886 657 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 AC024941.1-201ENST00000612250 334 ntBASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-1226P-201ENST00000384317 107 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 MIR1193-201ENST00000408109 78 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC019070.1-201ENST00000415008 1024 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 RPP40P1-201ENST00000426762 456 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC092185.1-201ENST00000491371 97 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC005726.1-201ENST00000494679 427 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC093278.1-201ENST00000494700 600 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 MTND4LP31-201ENST00000514859 294 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 IGKV2D-19-201ENST00000523346 262 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 CR383656.14-201ENST00000551951 406 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC112230.1-201ENST00000604342 547 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AL731566.2-201ENST00000618971 317 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC068620.4-201ENST00000636730 1182 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AL590396.4-201ENST00000636779 956 ntBASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.27□□□□□ -1.89
NUDCD3Q8IVD9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-932P-201ENST00000391108 106 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RPL22P22-201ENST00000395439 379 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RPL21P3-201ENST00000395517 478 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 EIF5P1-201ENST00000400019 1231 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 SSXP10-201ENST00000402595 565 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RN7SKP111-201ENST00000410349 271 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 OR51A3P-201ENST00000413596 924 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 UBE2V1P9-201ENST00000414760 368 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 MTCYBP24-201ENST00000420387 1106 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC009237.2-201ENST00000421358 284 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 NIPA2P1-201ENST00000426223 976 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC114973.1-201ENST00000429057 632 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 TRIM60P18-201ENST00000441518 828 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 OR51B8P-201ENST00000449892 769 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 SSXP4-201ENST00000451349 245 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RNU7-140P-201ENST00000459546 60 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms