Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 SNRPEP3-201ENST00000338402 276 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RNU6-878P-201ENST00000384578 110 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RNU6ATAC-201ENST00000408749 126 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RNU2-15P-201ENST00000410692 191 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 CYCSP19-201ENST00000411715 316 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RPS7P15-201ENST00000415804 584 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 TOMM22P1-201ENST00000418578 312 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 GLRXP1-201ENST00000423261 334 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RPL21P66-201ENST00000426566 466 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 BMS1P19-201ENST00000433925 393 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC007389.2-201ENST00000434630 306 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 TBCAP1-201ENST00000436520 327 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RPL23AP74-201ENST00000437246 471 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 FABP3P2-201ENST00000453169 399 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 OFD1P3Y-201ENST00000453312 783 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RN7SL271P-201ENST00000487601 295 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AP002812.1-201ENST00000495378 474 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC006390.1-201ENST00000508068 283 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC008837.2-201ENST00000513076 418 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RN7SKP31-201ENST00000516354 278 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC109635.4-202ENST00000531666 412 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AL049838.1-201ENST00000563647 981 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC012182.1-201ENST00000570133 895 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 RN7SL703P-201ENST00000578485 302 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 MIR5685-201ENST00000579080 79 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 RNU6-560P-201ENST00000364007 108 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 RNU6-629P-201ENST00000384061 103 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 RNU6-636P-201ENST00000384598 107 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 RNU6-906P-201ENST00000384700 70 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 TAF9BP1-201ENST00000396646 746 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AL356320.2-201ENST00000417263 507 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AL050321.1-201ENST00000432363 400 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 RN7SL542P-201ENST00000467147 294 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC010285.1-201ENST00000470580 392 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 RPL31P13-201ENST00000484151 370 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 HMGB1P28-201ENST00000507778 552 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC010625.1-201ENST00000511296 403 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 NARSP2-201ENST00000518524 679 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AL121603.1-201ENST00000553815 142 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 HIGD1AP17-201ENST00000554576 276 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 MTND1P8-201ENST00000571424 950 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AP001269.3-201ENST00000588718 329 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC245884.10-201ENST00000597355 337 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC025946.2-201ENST00000603398 234 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 RPL23AP92-201ENST00000603609 255 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 MTND3P19-201ENST00000603825 345 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 MIR92B-201ENST00000607575 96 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 MIR4278-201ENST00000636094 69 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 MIR1322-201ENST00000638013 71 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms