Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 RNU6-457P-201ENST00000363999 107 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AL139039.1-201ENST00000401900 692 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AL133457.1-201ENST00000564251 987 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AC096638.1-201ENST00000444678 216 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AC110588.1-201ENST00000559699 137 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 BRDTP1-201ENST00000605735 677 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AL591424.2-201ENST00000617023 128 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 TAB3P1-202ENST00000452645 1634 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 RNA5SP257-201ENST00000363023 116 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 HMGB1P25-201ENST00000468402 607 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 CREM-238ENST00000488741 651 ntTSL 2 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AC007938.3-201ENST00000604965 623 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 AC007496.3-201ENST00000624987 3443 ntBASIC1.59□□□□□ -2.16
UBR4Q5T4S7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
UBR4Q5T4S7 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AL031584.1-201ENST00000447169 754 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC068587.2-201ENST00000478386 781 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 RNA5SP102-201ENST00000516865 106 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AP003102.1-201ENST00000525638 661 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AL354719.1-201ENST00000406535 843 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 HSPE1P8-201ENST00000406997 288 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 MIR1271-201ENST00000408537 86 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 ANP32BP2-201ENST00000454525 545 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC022509.4-201ENST00000621404 572 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC016717.2-201ENST00000609089 5141 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 MAPK10-373ENST00000641983 6772 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AL589765.3-201ENST00000446084 462 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 ARL4AP1-201ENST00000503220 705 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AL139395.1-201ENST00000603662 160 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC002543.1-201ENST00000299783 1954 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AC007336.1-201ENST00000576365 3828 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 AL161431.1-201ENST00000618966 4205 ntBASIC1.58□□□□□ -2.16
UBR4Q5T4S7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
UBR4Q5T4S7 RNU6-492P-201ENST00000363035 104 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms