Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC009501.3-201ENST00000605001 1352 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTCH1Q13635 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 AL356489.2-201ENST00000566968 3528 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PTCH1Q13635 RPS7P13-201ENST00000413955 498 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 AC234782.4-201ENST00000417646 1048 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCH1Q13635 NDUFS5P3-201ENST00000450668 321 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.16□□□□□ -1.74
PTCH1Q13635 OR5G4P-201ENST00000525251 760 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 NOP56P3-201ENST00000549457 385 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCH1Q13635 AC009097.3-201ENST00000563557 1018 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 AL365400.2-201ENST00000605604 902 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 AL590808.1-201ENST00000618696 141 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 AC091903.1-201ENST00000624322 454 ntBASIC4.16□□□□□ -1.74
PTCH1Q13635 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCH1Q13635 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTCH1Q13635 AC134882.1-201ENST00000603738 1676 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTCH1Q13635 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PTCH1Q13635 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTCH1Q13635 AL136964.1-201ENST00000622038 2990 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTCH1Q13635 RNA5SP502-201ENST00000362694 119 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 RNU1-87P-201ENST00000363727 170 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 GTF2IP23-201ENST00000423746 351 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 MYL8P-204ENST00000431574 518 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 TPTE2P6-202ENST00000445572 1007 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 NECAP1P2-201ENST00000455668 727 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 HMGN1P18-201ENST00000457642 277 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 AC034159.1-201ENST00000513885 583 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 RN7SKP82-201ENST00000516786 223 ntBASIC4.15□□□□□ -1.74
PTCH1Q13635 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
PTCH1Q13635 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
PTCH1Q13635 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.15□□□□□ -1.74
PTCH1Q13635 ASNSP3-201ENST00000451989 1306 ntBASIC4.15□□□□□ -1.75
PTCH1Q13635 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PTCH1Q13635 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCH1Q13635 MIR142-201ENST00000384835 87 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 MIR708-201ENST00000390708 88 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 BMS1P22-201ENST00000414726 313 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCH1Q13635 AC003685.2-201ENST00000422795 395 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCH1Q13635 AL353093.1-201ENST00000441292 436 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCH1Q13635 AC108078.3-201ENST00000502633 489 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 OR5H4P-201ENST00000510851 923 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 SNORA48.9-201ENST00000516419 162 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 AC104027.1-201ENST00000521887 300 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 AC107016.2-201ENST00000547968 190 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCH1Q13635 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCH1Q13635 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCH1Q13635 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCH1Q13635 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCH1Q13635 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCH1Q13635 AP003122.5-201ENST00000527668 3766 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCH1Q13635 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.14□□□□□ -1.75
PTCH1Q13635 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCH1Q13635 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCH1Q13635 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PTCH1Q13635 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCH1Q13635 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PTCH1Q13635 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTCH1Q13635 MIR504-201ENST00000385065 83 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 SKINT1L-201ENST00000401057 817 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 HMGB1P13-201ENST00000406019 642 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 RPL23AP48-201ENST00000406913 488 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 AC010385.1-201ENST00000412374 256 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.13□□□□□ -1.75
PTCH1Q13635 MTCO3P4-201ENST00000419236 787 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.13□□□□□ -1.75
PTCH1Q13635 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.13□□□□□ -1.75
PTCH1Q13635 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.13□□□□□ -1.75
PTCH1Q13635 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.13□□□□□ -1.75
PTCH1Q13635 MTATP6P22-201ENST00000507369 598 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.13□□□□□ -1.75
PTCH1Q13635 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.13□□□□□ -1.75
PTCH1Q13635 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PTCH1Q13635 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.13□□□□□ -1.75
PTCH1Q13635 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTCH1Q13635 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTCH1Q13635 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.13□□□□□ -1.75
PTCH1Q13635 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.13□□□□□ -1.75
PTCH1Q13635 CBX3P2-202ENST00000583365 535 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 BX322635.1-201ENST00000605804 496 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.13□□□□□ -1.75
PTCH1Q13635 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.13□□□□□ -1.75
PTCH1Q13635 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTCH1Q13635 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PTCH1Q13635 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.13□□□□□ -1.75
PTCH1Q13635 ELF2P3-201ENST00000445099 1506 ntBASIC4.13□□□□□ -1.75
PTCH1Q13635 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.13□□□□□ -1.75
PTCH1Q13635 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms