Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNORD56.5-201ENST00000364281 72 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 OR6K3-202ENST00000368146 996 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 CD24P4-201ENST00000382840 243 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 MTCYBP24-201ENST00000420387 1106 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC023128.2-201ENST00000420880 1223 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC011242.1-201ENST00000433596 1158 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 SNRPEP4-201ENST00000435815 279 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 MUPP-201ENST00000438111 566 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 MED6P1-201ENST00000439659 713 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 Z99714.1-201ENST00000450463 807 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 RPS24P6-201ENST00000452670 400 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC087879.1-201ENST00000474343 374 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AP001025.2-201ENST00000490908 477 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 HMGB1P22-201ENST00000505315 124 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 MIR2682-201ENST00000580305 110 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC019159.1-201ENST00000605094 187 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AL109618.2-201ENST00000605527 211 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC015849.2-201ENST00000605738 409 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AL110115.1-201ENST00000614396 364 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC009464.1-201ENST00000615731 469 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC233263.6-201ENST00000631132 1963 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC024341.1-201ENST00000526444 1552 ntBASIC2.35□□□□□ -2.03
HIST1H1AQ02539 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 AC091564.4-201ENST00000533934 2194 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AL049737.1-201ENST00000413920 1403 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AP003122.5-201ENST00000527668 3766 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 RNU6-1027P-201ENST00000383998 107 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AC110754.1-201ENST00000399740 601 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AL356967.1-201ENST00000406305 431 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 HMGN2P35-201ENST00000412164 270 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AC005189.1-201ENST00000431286 310 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 ARL4AP4-201ENST00000434170 518 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 CDC27P1-201ENST00000445384 715 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 UBBP3-201ENST00000445497 241 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 MORF4L1P4-201ENST00000450245 976 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 NPM1P13-201ENST00000452663 865 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 RPL37P3-201ENST00000456825 293 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 ACTR6P1-201ENST00000514311 1104 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 HIGD1AP3-201ENST00000515857 278 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AC090695.1-201ENST00000561269 1222 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 CKS1BP3-201ENST00000600888 237 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 PRELID3BP8-201ENST00000604148 295 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 U73479.1-201ENST00000618062 168 ntBASIC2.34□□□□□ -2.03
HIST1H1AQ02539 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.34□□□□□ -2.03
HIST1H1AQ02539 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
HIST1H1AQ02539 AC006378.2-201ENST00000623178 2476 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 RPL23AP57-201ENST00000332361 466 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 U3.19-201ENST00000390893 196 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AL139095.1-201ENST00000404326 391 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 RN7SKP220-201ENST00000410611 288 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC006028.1-201ENST00000438379 402 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 RPL21P133-201ENST00000443666 476 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 Z95327.1-201ENST00000446082 482 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 OR6C72P-201ENST00000451403 892 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 RN7SL863P-201ENST00000462370 296 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC008155.2-201ENST00000464337 397 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC017015.1-201ENST00000477387 286 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 RPL7P23-201ENST00000493874 747 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AIG1P1-201ENST00000503376 148 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 DUXAP2-201ENST00000519198 589 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC019227.1-201ENST00000526902 510 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 MTND2P26-201ENST00000528255 1029 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms