Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 HIGD1AP13-201ENST00000509878 289 ntBASIC3.13□□□□□ -1.91
GTF2BQ00403 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.13□□□□□ -1.91
GTF2BQ00403 AC010306.1-201ENST00000523223 1117 ntBASIC3.13□□□□□ -1.91
GTF2BQ00403 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GTF2BQ00403 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.13□□□□□ -1.91
GTF2BQ00403 AC113194.1-201ENST00000606037 500 ntBASIC3.13□□□□□ -1.91
GTF2BQ00403 AC105429.2-201ENST00000610567 517 ntBASIC3.13□□□□□ -1.91
GTF2BQ00403 PLCE1P1-201ENST00000622094 305 ntBASIC3.13□□□□□ -1.91
GTF2BQ00403 AC006065.5-201ENST00000623427 349 ntBASIC3.13□□□□□ -1.91
GTF2BQ00403 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GTF2BQ00403 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GTF2BQ00403 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
GTF2BQ00403 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
GTF2BQ00403 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2BQ00403 GNG5P1-201ENST00000255500 204 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2BQ00403 SNORA48.8-201ENST00000391324 134 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 AL451074.5-201ENST00000415894 435 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2BQ00403 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2BQ00403 RPL21P40-201ENST00000428586 483 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 AC093156.1-201ENST00000440382 670 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 AL135938.1-201ENST00000443141 297 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2BQ00403 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.12□□□□□ -1.91
GTF2BQ00403 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2BQ00403 AC118282.1-201ENST00000506408 765 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2BQ00403 FABP5P6-201ENST00000510588 409 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 AC119751.1-201ENST00000513357 765 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.12□□□□□ -1.91
GTF2BQ00403 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.12□□□□□ -1.91
GTF2BQ00403 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2BQ00403 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2BQ00403 OR4T1P-201ENST00000554933 911 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2BQ00403 AL020991.1-201ENST00000612314 373 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 AC048347.1-201ENST00000624621 427 ntBASIC3.12□□□□□ -1.91
GTF2BQ00403 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.12□□□□□ -1.91
GTF2BQ00403 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2BQ00403 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2BQ00403 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.12□□□□□ -1.91
GTF2BQ00403 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2BQ00403 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2BQ00403 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2BQ00403 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2BQ00403 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.12□□□□□ -1.91
GTF2BQ00403 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.12□□□□□ -1.91
GTF2BQ00403 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GTF2BQ00403 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GTF2BQ00403 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 SNORA18.3-201ENST00000384122 132 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 RNU6-452P-201ENST00000384406 107 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AC096664.2-201ENST00000411843 406 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.11□□□□□ -1.91
GTF2BQ00403 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 RPS20P5-201ENST00000434808 360 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AC107083.1-201ENST00000439643 279 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 SLC31A1P1-201ENST00000451221 567 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.11□□□□□ -1.91
GTF2BQ00403 RPL21P103-201ENST00000479921 488 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.11□□□□□ -1.91
GTF2BQ00403 POU5F1P7-201ENST00000508759 541 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2BQ00403 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2BQ00403 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2BQ00403 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.11□□□□□ -1.91
GTF2BQ00403 CYCSP39-201ENST00000565821 309 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.11□□□□□ -1.91
GTF2BQ00403 AC083760.1-201ENST00000589621 670 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AL513477.2-201ENST00000607858 568 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AL391597.1-201ENST00000618707 694 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2BQ00403 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GTF2BQ00403 AC092593.1-201ENST00000515413 1815 ntBASIC3.11□□□□□ -1.91
GTF2BQ00403 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GTF2BQ00403 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
GTF2BQ00403 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.1□□□□□ -1.91
GTF2BQ00403 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2BQ00403 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
GTF2BQ00403 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2BQ00403 RNA5SP391-201ENST00000363456 119 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.1□□□□□ -1.91
GTF2BQ00403 HSPE1P26-201ENST00000405341 275 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 RPL5P18-201ENST00000406671 891 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.1□□□□□ -1.91
GTF2BQ00403 NDUFB4P5-201ENST00000415445 361 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 AL645937.1-202ENST00000421799 937 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.1□□□□□ -1.91
GTF2BQ00403 VDAC1P3-201ENST00000434069 851 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 RPS7P5-201ENST00000441482 581 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.1□□□□□ -1.91
GTF2BQ00403 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.1□□□□□ -1.91
GTF2BQ00403 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.1□□□□□ -1.91
GTF2BQ00403 AP001025.2-201ENST00000490908 477 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 AC090071.1-201ENST00000507713 644 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 AC117522.3-201ENST00000507974 584 ntBASIC3.1□□□□□ -1.91
GTF2BQ00403 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.1□□□□□ -1.91
GTF2BQ00403 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.1□□□□□ -1.91
GTF2BQ00403 OR4H12P-201ENST00000556269 907 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms