Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PRKDCP78527 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PRKDCP78527 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.87□□□□□ -2.11
PRKDCP78527 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.87□□□□□ -2.11
PRKDCP78527 AC004801.2-202ENST00000463559 283 ntBASIC1.87□□□□□ -2.11
PRKDCP78527 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC1.87□□□□□ -2.11
PRKDCP78527 FAM92A1P2-202ENST00000504766 877 ntBASIC1.87□□□□□ -2.11
PRKDCP78527 AP003385.6-201ENST00000531603 374 ntBASIC1.87□□□□□ -2.11
PRKDCP78527 AL391156.1-201ENST00000554965 554 ntBASIC1.87□□□□□ -2.11
PRKDCP78527 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PRKDCP78527 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.87□□□□□ -2.11
PRKDCP78527 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
PRKDCP78527 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PRKDCP78527 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PRKDCP78527 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.87□□□□□ -2.11
PRKDCP78527 SNRPGP9-201ENST00000456025 225 ntBASIC1.87□□□□□ -2.11
PRKDCP78527 AC090543.2-201ENST00000483963 348 ntBASIC1.87□□□□□ -2.11
PRKDCP78527 AC034244.2-201ENST00000514668 858 ntBASIC1.87□□□□□ -2.11
PRKDCP78527 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
PRKDCP78527 AL359893.1-201ENST00000447628 1580 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AL359511.1-201ENST00000402970 211 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 SETP15-201ENST00000412724 337 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 FCF1P1-201ENST00000432690 571 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.86□□□□□ -2.11
PRKDCP78527 RN7SL442P-201ENST00000473804 320 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AC092436.3-201ENST00000511788 257 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 RN7SKP282-201ENST00000516824 299 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.86□□□□□ -2.11
PRKDCP78527 TGIF1P1-201ENST00000558095 802 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AC068313.1-201ENST00000604028 1008 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 snoU13.31-201ENST00000607291 104 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AC104237.2-201ENST00000612456 443 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PRKDCP78527 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.86□□□□□ -2.11
PRKDCP78527 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PRKDCP78527 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PRKDCP78527 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PRKDCP78527 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PRKDCP78527 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.86□□□□□ -2.11
PRKDCP78527 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.86□□□□□ -2.11
PRKDCP78527 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.86□□□□□ -2.11
PRKDCP78527 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC1.86□□□□□ -2.11
PRKDCP78527 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PRKDCP78527 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PRKDCP78527 AC005332.5-201ENST00000591222 2919 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AC087565.3-202ENST00000642085 1603 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.86□□□□□ -2.11
PRKDCP78527 RPS6P4-201ENST00000494693 758 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AC118282.1-201ENST00000506408 765 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AC119751.1-201ENST00000513357 765 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AL133271.1-201ENST00000538229 291 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.86□□□□□ -2.11
PRKDCP78527 AC011611.5-201ENST00000552477 578 ntBASIC1.86□□□□□ -2.11
PRKDCP78527 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PRKDCP78527 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
PRKDCP78527 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
PRKDCP78527 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.86□□□□□ -2.11
PRKDCP78527 RNU1-17P-201ENST00000363022 152 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 AC112220.1-201ENST00000434628 355 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 RPL23AP16-201ENST00000441715 421 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.85□□□□□ -2.11
PRKDCP78527 AC011494.1-201ENST00000596454 237 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.85□□□□□ -2.11
PRKDCP78527 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 AC097634.1-201ENST00000604491 2467 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 Y_RNA.112-201ENST00000363250 102 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 YPEL5P1-201ENST00000419731 367 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 Z82205.1-201ENST00000428456 297 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 MTCO3P21-201ENST00000430791 643 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.85□□□□□ -2.11
PRKDCP78527 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.85□□□□□ -2.11
PRKDCP78527 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.85□□□□□ -2.11
PRKDCP78527 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
PRKDCP78527 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.85□□□□□ -2.11
PRKDCP78527 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 RN7SKP32-201ENST00000410167 303 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 Z98742.2-201ENST00000431564 187 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.85□□□□□ -2.11
PRKDCP78527 MOB1AP2-201ENST00000446060 614 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 AL353705.4-201ENST00000449661 238 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.85□□□□□ -2.11
PRKDCP78527 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PRKDCP78527 RNU1-73P-201ENST00000383971 164 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 RNU6-55P-201ENST00000411092 107 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 RNU6-954P-201ENST00000411355 107 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 AL354710.1-201ENST00000453641 246 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 HMGN1P18-201ENST00000457642 277 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.85□□□□□ -2.11
PRKDCP78527 AC103858.2-201ENST00000621471 543 ntBASIC1.85□□□□□ -2.11
PRKDCP78527 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC1.85□□□□□ -2.11
PRKDCP78527 AL023284.1-201ENST00000403956 276 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms