Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
TPM4P67936 RNU6-826P-201ENST00000516827 104 ntBASIC3.31□□□□□ -1.88
TPM4P67936 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.31□□□□□ -1.88
TPM4P67936 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
TPM4P67936 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM4P67936 NCAPGP2-201ENST00000557911 754 ntBASIC3.31□□□□□ -1.88
TPM4P67936 MIR3922-201ENST00000585192 84 ntBASIC3.31□□□□□ -1.88
TPM4P67936 AC005242.1-201ENST00000585658 438 ntBASIC3.31□□□□□ -1.88
TPM4P67936 MIR6748-201ENST00000610433 71 ntBASIC3.31□□□□□ -1.88
TPM4P67936 AC131902.3-201ENST00000611767 581 ntBASIC3.31□□□□□ -1.88
TPM4P67936 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TPM4P67936 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TPM4P67936 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.3□□□□□ -1.88
TPM4P67936 AC073325.2-201ENST00000339545 159 ntBASIC3.3□□□□□ -1.88
TPM4P67936 RNU6-98P-201ENST00000384173 107 ntBASIC3.3□□□□□ -1.88
TPM4P67936 RNU6-1181P-201ENST00000384191 106 ntBASIC3.3□□□□□ -1.88
TPM4P67936 SNORA57.1-201ENST00000391227 145 ntBASIC3.3□□□□□ -1.88
TPM4P67936 RPS7P15-201ENST00000415804 584 ntBASIC3.3□□□□□ -1.88
TPM4P67936 AC245052.5-201ENST00000416320 649 ntBASIC3.3□□□□□ -1.88
TPM4P67936 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM4P67936 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM4P67936 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TPM4P67936 RPL17P49-201ENST00000443728 411 ntBASIC3.3□□□□□ -1.88
TPM4P67936 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM4P67936 SYPL1P1-201ENST00000473622 768 ntBASIC3.3□□□□□ -1.88
TPM4P67936 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM4P67936 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TPM4P67936 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM4P67936 AC009303.3-201ENST00000591103 736 ntBASIC3.3□□□□□ -1.88
TPM4P67936 BNIP3P7-201ENST00000605641 516 ntBASIC3.3□□□□□ -1.88
TPM4P67936 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM4P67936 AC018692.3-201ENST00000623929 123 ntBASIC3.3□□□□□ -1.88
TPM4P67936 AC020923.1-201ENST00000624021 917 ntBASIC3.3□□□□□ -1.88
TPM4P67936 AC009039.2-201ENST00000624524 529 ntBASIC3.3□□□□□ -1.88
TPM4P67936 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM4P67936 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TPM4P67936 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM4P67936 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TPM4P67936 NSRP1P1-201ENST00000444067 1693 ntBASIC3.3□□□□□ -1.88
TPM4P67936 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM4P67936 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM4P67936 AL161431.1-201ENST00000618966 4205 ntBASIC3.3□□□□□ -1.88
TPM4P67936 AL049781.1-201ENST00000623195 3585 ntBASIC3.3□□□□□ -1.88
TPM4P67936 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
TPM4P67936 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
TPM4P67936 MIR22-201ENST00000362190 85 ntBASIC3.29□□□□□ -1.88
TPM4P67936 RNU1-35P-201ENST00000362782 153 ntBASIC3.29□□□□□ -1.88
TPM4P67936 RNU6-891P-201ENST00000384280 111 ntBASIC3.29□□□□□ -1.88
TPM4P67936 MIR554-201ENST00000384874 96 ntBASIC3.29□□□□□ -1.88
TPM4P67936 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
TPM4P67936 MIR1250-201ENST00000408098 113 ntBASIC3.29□□□□□ -1.88
TPM4P67936 RNU4-47P-201ENST00000410876 114 ntBASIC3.29□□□□□ -1.88
TPM4P67936 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.29□□□□□ -1.88
TPM4P67936 HMGN2P31-201ENST00000432430 273 ntBASIC3.29□□□□□ -1.88
TPM4P67936 AC006028.1-201ENST00000438379 402 ntBASIC3.29□□□□□ -1.88
TPM4P67936 H2AFZP6-201ENST00000444403 394 ntBASIC3.29□□□□□ -1.88
TPM4P67936 CYCSP35-201ENST00000451978 304 ntBASIC3.29□□□□□ -1.88
TPM4P67936 NPM1P13-201ENST00000452663 865 ntBASIC3.29□□□□□ -1.88
TPM4P67936 RPS24P6-201ENST00000452670 400 ntBASIC3.29□□□□□ -1.88
TPM4P67936 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.29□□□□□ -1.88
TPM4P67936 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.29□□□□□ -1.88
TPM4P67936 RNU6-491P-201ENST00000516099 110 ntBASIC3.29□□□□□ -1.88
TPM4P67936 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
TPM4P67936 OR5G4P-201ENST00000525251 760 ntBASIC3.29□□□□□ -1.88
TPM4P67936 AC084824.1-201ENST00000550917 1005 ntBASIC3.29□□□□□ -1.88
TPM4P67936 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.29□□□□□ -1.88
TPM4P67936 AL031985.2-201ENST00000600955 480 ntBASIC3.29□□□□□ -1.88
TPM4P67936 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.29□□□□□ -1.88
TPM4P67936 OR5BR1P-201ENST00000524992 1330 ntBASIC3.28□□□□□ -1.88
TPM4P67936 OR6K3-202ENST00000368146 996 ntBASIC3.28□□□□□ -1.88
TPM4P67936 U3.42-201ENST00000408746 214 ntBASIC3.28□□□□□ -1.88
TPM4P67936 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM4P67936 AC109780.2-201ENST00000413467 845 ntBASIC3.28□□□□□ -1.88
TPM4P67936 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.28□□□□□ -1.88
TPM4P67936 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.28□□□□□ -1.88
TPM4P67936 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.28□□□□□ -1.88
TPM4P67936 Z85994.2-201ENST00000434327 452 ntBASIC3.28□□□□□ -1.88
TPM4P67936 RPS7P2-201ENST00000435134 607 ntBASIC3.28□□□□□ -1.88
TPM4P67936 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.28□□□□□ -1.88
TPM4P67936 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.28□□□□□ -1.88
TPM4P67936 RSL24D1P2-201ENST00000445584 366 ntBASIC3.28□□□□□ -1.88
TPM4P67936 snoU13.24-201ENST00000458998 104 ntBASIC3.28□□□□□ -1.88
TPM4P67936 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM4P67936 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TPM4P67936 FABP5P6-201ENST00000510588 409 ntBASIC3.28□□□□□ -1.88
TPM4P67936 SNORD59.2-201ENST00000516873 68 ntBASIC3.28□□□□□ -1.88
TPM4P67936 RNU1-45P-201ENST00000517191 141 ntBASIC3.28□□□□□ -1.88
TPM4P67936 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.28□□□□□ -1.88
TPM4P67936 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM4P67936 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.28□□□□□ -1.88
TPM4P67936 AC107016.2-201ENST00000547968 190 ntBASIC3.28□□□□□ -1.88
TPM4P67936 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.28□□□□□ -1.88
TPM4P67936 UBL5P2-201ENST00000583788 219 ntBASIC3.28□□□□□ -1.88
TPM4P67936 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.28□□□□□ -1.88
TPM4P67936 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM4P67936 AC090115.4-201ENST00000609970 188 ntBASIC3.28□□□□□ -1.88
TPM4P67936 AC016717.3-201ENST00000624730 554 ntBASIC3.28□□□□□ -1.88
TPM4P67936 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM4P67936 MAPK10-322ENST00000641485 4530 ntBASIC3.28□□□□□ -1.88
TPM4P67936 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms