Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC005344.1-201ENST00000613391 459 ntBASIC3.42□□□□□ -1.86
RPS4XP62701 AC008083.4-201ENST00000615076 444 ntBASIC3.42□□□□□ -1.86
RPS4XP62701 AC022960.3-201ENST00000619794 441 ntBASIC3.42□□□□□ -1.86
RPS4XP62701 AC073348.1-201ENST00000623002 331 ntBASIC3.42□□□□□ -1.86
RPS4XP62701 AC004777.1-201ENST00000624317 287 ntBASIC3.42□□□□□ -1.86
RPS4XP62701 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPS4XP62701 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPS4XP62701 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPS4XP62701 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPS4XP62701 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPS4XP62701 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPS4XP62701 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPS4XP62701 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.42□□□□□ -1.86
RPS4XP62701 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPS4XP62701 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
RPS4XP62701 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.41□□□□□ -1.86
RPS4XP62701 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.41□□□□□ -1.86
RPS4XP62701 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 SNORD46.1-201ENST00000364139 104 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 MIR30B-201ENST00000384850 88 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 MIR3074-201ENST00000384885 81 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 RNU2-28P-201ENST00000410457 189 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.41□□□□□ -1.86
RPS4XP62701 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 RPS3AP37-201ENST00000419176 745 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 MRPS36P1-201ENST00000421291 307 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 MTCO2P23-201ENST00000425216 680 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.41□□□□□ -1.86
RPS4XP62701 SKP1P1-201ENST00000438081 489 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.41□□□□□ -1.86
RPS4XP62701 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.41□□□□□ -1.86
RPS4XP62701 AC006480.1-201ENST00000449887 378 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 RFC5P1-201ENST00000454419 874 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 RPL5P24-201ENST00000463742 885 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 SYPL1P1-201ENST00000473622 768 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC108734.3-201ENST00000481241 1165 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS4XP62701 MIR2114-201ENST00000516645 80 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS4XP62701 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS4XP62701 AC008489.1-201ENST00000524271 483 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AP003385.6-201ENST00000531603 374 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
RPS4XP62701 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS4XP62701 AC138915.2-201ENST00000569776 97 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC015726.1-201ENST00000602353 681 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC021749.1-201ENST00000604322 607 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 SNORA62.6-201ENST00000606322 83 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 SNORA51-201ENST00000606420 132 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS4XP62701 AL157392.4-201ENST00000609756 345 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
RPS4XP62701 AC009318.4-201ENST00000620496 486 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC244100.1-202ENST00000621554 382 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.41□□□□□ -1.86
RPS4XP62701 C2orf27A-204ENST00000623058 969 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.41□□□□□ -1.86
RPS4XP62701 AC138649.5-201ENST00000637456 137 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RPS4XP62701 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 AP004289.2-201ENST00000444413 1457 ntBASIC3.41□□□□□ -1.86
RPS4XP62701 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS4XP62701 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.4□□□□□ -1.86
RPS4XP62701 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RPS4XP62701 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.4□□□□□ -1.86
RPS4XP62701 AC106754.1-201ENST00000562632 1513 ntBASIC3.4□□□□□ -1.86
RPS4XP62701 CR381670.1-201ENST00000624291 1693 ntBASIC3.4□□□□□ -1.86
RPS4XP62701 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPS4XP62701 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPS4XP62701 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPS4XP62701 SNORA71.3-201ENST00000362582 128 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 RNVU1-3-201ENST00000364313 161 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPS4XP62701 RNU6-657P-201ENST00000383904 107 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.4□□□□□ -1.87
RPS4XP62701 AL024474.1-201ENST00000404655 591 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 SNORA11.1-201ENST00000408133 129 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 GTF2IP23-201ENST00000423746 351 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 AL035410.1-201ENST00000427409 427 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 AC006548.1-201ENST00000427470 102 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 YME1L1P1-201ENST00000429435 297 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 TVP23BP2-201ENST00000455082 615 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 RPS20P32-201ENST00000456044 356 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 AC078918.1-201ENST00000498515 228 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 TPT1P8-201ENST00000510120 555 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 MTCO1P30-201ENST00000515244 580 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 RNU6-1225P-201ENST00000516336 65 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 RN7SKP31-201ENST00000516354 278 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 RN7SKP83-201ENST00000516512 178 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms