Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 SNORD16-201ENST00000362803 99 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 RNU4-42P-201ENST00000364738 142 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
RNF144AP50876 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 Y_RNA.526-201ENST00000384572 110 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 Y_RNA.577-201ENST00000384794 101 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 MIR137-201ENST00000385223 102 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 OSTCP4-201ENST00000424397 449 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AL158071.1-201ENST00000430315 461 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 LINC00328-2P-201ENST00000436585 219 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AL031274.1-201ENST00000450334 232 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 OR2AQ1P-201ENST00000451972 200 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 FABP5P13-201ENST00000452144 328 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AC099670.1-201ENST00000455141 783 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 Z83838.1-202ENST00000456225 839 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AC084198.1-201ENST00000477747 402 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 RN7SL714P-201ENST00000487050 298 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 HMGB1P21-201ENST00000502313 581 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 COX7A2P2-201ENST00000505291 250 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF144AP50876 AP003733.2-201ENST00000529409 171 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF144AP50876 AC009120.3-201ENST00000563335 499 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AC090517.1-201ENST00000569307 266 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AC006600.1-201ENST00000572529 153 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 MIR548AI-201ENST00000579940 88 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF144AP50876 GLYATL1P2-202ENST00000588046 902 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF144AP50876 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.83□□□□□ -1.48
RNF144AP50876 AL359547.2-201ENST00000615810 418 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF144AP50876 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF144AP50876 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF144AP50876 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF144AP50876 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RNF144AP50876 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 AC097063.1-201ENST00000426714 1797 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF144AP50876 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RNF144AP50876 PROS2P-201ENST00000474651 1951 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 AP001541.1-201ENST00000623322 1904 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RNF144AP50876 RN7SKP162-201ENST00000363605 345 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 Y_RNA.297-201ENST00000364950 91 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 RNA5SP485-201ENST00000365053 119 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 RNU6-715P-201ENST00000365204 103 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 SNORA51.11-201ENST00000384442 131 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 MIR551B-201ENST00000384984 96 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 RNU6-516P-201ENST00000411381 104 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF144AP50876 RPL7P2-201ENST00000427639 268 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AL360081.1-201ENST00000428299 555 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF144AP50876 AL645568.3-201ENST00000433683 316 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF144AP50876 AL445928.1-201ENST00000435545 222 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AL645936.1-201ENST00000441979 518 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 CFL1P4-201ENST00000451536 498 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF144AP50876 AL139109.1-201ENST00000455491 297 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 SNX18P26-201ENST00000458433 740 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF144AP50876 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 AC106800.3-201ENST00000511389 308 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AC022868.1-201ENST00000517767 391 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.82□□□□□ -1.48
RNF144AP50876 AP003396.4-201ENST00000527574 265 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF144AP50876 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF144AP50876 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF144AP50876 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF144AP50876 AC007494.1-201ENST00000562293 760 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AC015720.2-201ENST00000567709 334 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF144AP50876 AC027229.1-201ENST00000583887 253 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AC005332.4-201ENST00000592752 579 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AC104763.2-201ENST00000604179 382 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 AL158032.1-201ENST00000605401 106 ntBASIC5.82□□□□□ -1.48
RNF144AP50876 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF144AP50876 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF144AP50876 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
RNF144AP50876 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms