Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MIR8058-201ENST00000615737 89 ntBASIC3.53□□□□□ -1.84
CASP4P49662 AC092628.2-201ENST00000622492 339 ntBASIC3.53□□□□□ -1.84
CASP4P49662 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.53□□□□□ -1.84
CASP4P49662 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.53□□□□□ -1.84
CASP4P49662 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.53□□□□□ -1.84
CASP4P49662 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CASP4P49662 PABPC1P7-201ENST00000413177 1513 ntBASIC3.53□□□□□ -1.84
CASP4P49662 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.53□□□□□ -1.84
CASP4P49662 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CASP4P49662 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CASP4P49662 ELL2P4-201ENST00000446870 1376 ntBASIC3.52□□□□□ -1.85
CASP4P49662 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CASP4P49662 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 SNORA63.1-201ENST00000362493 131 ntBASIC3.52□□□□□ -1.85
CASP4P49662 RNA5SP189-201ENST00000364920 115 ntBASIC3.52□□□□□ -1.85
CASP4P49662 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 SKINT1L-201ENST00000401057 817 ntBASIC3.52□□□□□ -1.85
CASP4P49662 RNA5SP44-201ENST00000410446 133 ntBASIC3.52□□□□□ -1.85
CASP4P49662 RNU6-77P-201ENST00000410554 91 ntBASIC3.52□□□□□ -1.85
CASP4P49662 RPL31P2-201ENST00000413849 377 ntBASIC3.52□□□□□ -1.85
CASP4P49662 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.52□□□□□ -1.85
CASP4P49662 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 GTF2IP23-201ENST00000423746 351 ntBASIC3.52□□□□□ -1.85
CASP4P49662 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.52□□□□□ -1.85
CASP4P49662 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.52□□□□□ -1.85
CASP4P49662 Z99127.3-201ENST00000448158 395 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.52□□□□□ -1.85
CASP4P49662 BTF3P5-201ENST00000457252 467 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.52□□□□□ -1.85
CASP4P49662 AC087879.1-201ENST00000474343 374 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.52□□□□□ -1.85
CASP4P49662 AC078918.1-201ENST00000498515 228 ntBASIC3.52□□□□□ -1.85
CASP4P49662 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.52□□□□□ -1.85
CASP4P49662 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 HIGD1AP3-201ENST00000515857 278 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AC124293.1-201ENST00000530034 493 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AP003168.1-201ENST00000530091 307 ntBASIC3.52□□□□□ -1.85
CASP4P49662 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CASP4P49662 EIF5A2P1-201ENST00000564027 460 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AC124283.4-201ENST00000581815 456 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.52□□□□□ -1.85
CASP4P49662 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.52□□□□□ -1.85
CASP4P49662 CKS1BP3-201ENST00000600888 237 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AC018754.1-201ENST00000607486 925 ntBASIC3.52□□□□□ -1.85
CASP4P49662 U73479.1-201ENST00000618062 168 ntBASIC3.52□□□□□ -1.85
CASP4P49662 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.52□□□□□ -1.85
CASP4P49662 AC004777.1-201ENST00000624317 287 ntBASIC3.52□□□□□ -1.85
CASP4P49662 AL356118.1-201ENST00000635272 1078 ntBASIC3.52□□□□□ -1.85
CASP4P49662 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.52□□□□□ -1.85
CASP4P49662 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.52□□□□□ -1.85
CASP4P49662 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CASP4P49662 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CASP4P49662 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CASP4P49662 AC025263.3-201ENST00000622965 1396 ntBASIC3.51□□□□□ -1.85
CASP4P49662 AC004972.1-201ENST00000623934 2209 ntBASIC3.51□□□□□ -1.85
CASP4P49662 AC005183.1-201ENST00000603687 1979 ntBASIC3.51□□□□□ -1.85
CASP4P49662 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.51□□□□□ -1.85
CASP4P49662 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CASP4P49662 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CASP4P49662 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CASP4P49662 SNORD56.3-201ENST00000363507 71 ntBASIC3.51□□□□□ -1.85
CASP4P49662 RNA5SP267-201ENST00000364893 126 ntBASIC3.51□□□□□ -1.85
CASP4P49662 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CASP4P49662 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CASP4P49662 AC008280.1-201ENST00000418851 412 ntBASIC3.51□□□□□ -1.85
CASP4P49662 RPL31P12-201ENST00000422587 358 ntBASIC3.51□□□□□ -1.85
CASP4P49662 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.51□□□□□ -1.85
CASP4P49662 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.51□□□□□ -1.85
CASP4P49662 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.51□□□□□ -1.85
CASP4P49662 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.51□□□□□ -1.85
CASP4P49662 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 AC091862.1-201ENST00000438016 1100 ntBASIC3.51□□□□□ -1.85
CASP4P49662 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.51□□□□□ -1.85
CASP4P49662 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 RPL7P49-201ENST00000471402 708 ntBASIC3.51□□□□□ -1.85
CASP4P49662 RPS27P23-201ENST00000487608 251 ntBASIC3.51□□□□□ -1.85
CASP4P49662 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 RNF138P1-201ENST00000502765 546 ntBASIC3.51□□□□□ -1.85
CASP4P49662 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 RNU6-202P-201ENST00000515998 96 ntBASIC3.51□□□□□ -1.85
CASP4P49662 SNORA64.4-201ENST00000516632 81 ntBASIC3.51□□□□□ -1.85
CASP4P49662 AP001207.2-201ENST00000519490 539 ntBASIC3.51□□□□□ -1.85
CASP4P49662 HIGD1AP6-201ENST00000521833 279 ntBASIC3.51□□□□□ -1.85
CASP4P49662 OR5D17P-201ENST00000531492 978 ntBASIC3.51□□□□□ -1.85
CASP4P49662 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.51□□□□□ -1.85
CASP4P49662 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.51□□□□□ -1.85
CASP4P49662 AC022069.1-201ENST00000582910 658 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms