Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.04□□□□□ -1.92
CX3CR1P49238 RN7SKP13-201ENST00000515933 244 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CR1P49238 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CR1P49238 LSM6P2-201ENST00000552208 177 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CR1P49238 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CR1P49238 AC092474.3-201ENST00000603022 568 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CR1P49238 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 AC073968.1-201ENST00000618594 637 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 AL590396.4-201ENST00000636779 956 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 MTND2P41-201ENST00000637599 773 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CX3CR1P49238 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CR1P49238 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CR1P49238 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CR1P49238 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CR1P49238 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.03□□□□□ -1.92
CX3CR1P49238 AL645568.2-201ENST00000432815 1337 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CR1P49238 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CR1P49238 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
CX3CR1P49238 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CR1P49238 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CR1P49238 MIR16-1-201ENST00000385271 89 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AP002784.2-201ENST00000397300 549 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 RPL21P17-201ENST00000397467 475 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CR1P49238 AC093578.1-201ENST00000415219 368 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AC017079.2-201ENST00000416102 485 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 MTCO3P12-201ENST00000416718 547 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AC245291.1-201ENST00000419501 328 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CR1P49238 GLRXP1-201ENST00000423261 334 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CR1P49238 MTCYBP31-201ENST00000438855 1122 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CR1P49238 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CR1P49238 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.03□□□□□ -1.92
CX3CR1P49238 snoU13.4-201ENST00000458916 104 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AC112518.2-201ENST00000508565 425 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AC109471.1-201ENST00000511631 612 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 RNA5SP468-201ENST00000516782 93 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AC107934.2-201ENST00000518653 310 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CR1P49238 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.03□□□□□ -1.92
CX3CR1P49238 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CX3CR1P49238 AC084824.1-201ENST00000550917 1005 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CR1P49238 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CR1P49238 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.03□□□□□ -1.92
CX3CR1P49238 SNORD39.3-201ENST00000584451 71 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CR1P49238 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CR1P49238 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CR1P49238 MIR8084-201ENST00000614105 89 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 AC130650.2-201ENST00000618736 2403 ntBASIC3.03□□□□□ -1.92
CX3CR1P49238 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CR1P49238 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.03□□□□□ -1.92
CX3CR1P49238 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.03□□□□□ -1.93
CX3CR1P49238 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.03□□□□□ -1.93
CX3CR1P49238 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 AL512283.1-201ENST00000606756 1384 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CX3CR1P49238 AL359837.1-201ENST00000381357 287 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 RNU6-730P-201ENST00000383954 104 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 SNORA57.1-201ENST00000391227 145 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 RPS7P15-201ENST00000415804 584 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CR1P49238 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 RPL23AP82-202ENST00000427528 469 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CR1P49238 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CR1P49238 AL445584.1-201ENST00000431451 330 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 KCTD10P1-201ENST00000434203 625 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 RPL23AP22-201ENST00000437556 453 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC127537.2-201ENST00000439258 465 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 RABEPKP1-201ENST00000440529 1026 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC004022.1-201ENST00000447766 1066 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CR1P49238 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CR1P49238 CENPBD1P1-201ENST00000464061 469 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CR1P49238 AC021205.2-201ENST00000480069 347 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 ACTR3P3-201ENST00000480448 893 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC021146.5-201ENST00000503544 545 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms