Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNFP41002 RNU5E-8P-201ENST00000363502 116 ntBASIC5.35□□□□□ -1.55
CCNFP41002 RN7SKP124-201ENST00000364730 341 ntBASIC5.35□□□□□ -1.55
CCNFP41002 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNFP41002 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNFP41002 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNFP41002 RPL31P2-201ENST00000413849 377 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AL358176.3-201ENST00000420757 454 ntBASIC5.35□□□□□ -1.55
CCNFP41002 OR4F13P-201ENST00000428478 931 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNFP41002 RPL36AP53-201ENST00000432891 316 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNFP41002 AC108734.1-201ENST00000439549 399 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AC019185.1-201ENST00000442718 389 ntBASIC5.35□□□□□ -1.55
CCNFP41002 MRPL50P4-201ENST00000446432 475 ntBASIC5.35□□□□□ -1.55
CCNFP41002 NOP56P2-201ENST00000447491 769 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNFP41002 RPL7P19-201ENST00000469948 618 ntBASIC5.35□□□□□ -1.55
CCNFP41002 HMGN1P10-201ENST00000474557 553 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AC021382.1-201ENST00000483523 359 ntBASIC5.35□□□□□ -1.55
CCNFP41002 EIF4EP3-201ENST00000498782 656 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNFP41002 AC117522.3-201ENST00000507974 584 ntBASIC5.35□□□□□ -1.55
CCNFP41002 RNU7-30P-201ENST00000516835 62 ntBASIC5.35□□□□□ -1.55
CCNFP41002 SNORD60.2-201ENST00000516883 86 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNFP41002 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNFP41002 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNFP41002 AC079075.1-201ENST00000559543 878 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.35□□□□□ -1.55
CCNFP41002 AC005668.1-201ENST00000571142 476 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNFP41002 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.35□□□□□ -1.55
CCNFP41002 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNFP41002 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.35□□□□□ -1.55
CCNFP41002 KC877982.1-201ENST00000602313 470 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNFP41002 MIR6729-201ENST00000618194 65 ntBASIC5.35□□□□□ -1.55
CCNFP41002 AC009248.2-201ENST00000619826 254 ntBASIC5.35□□□□□ -1.55
CCNFP41002 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCNFP41002 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNFP41002 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCNFP41002 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNFP41002 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNFP41002 AP001642.1-201ENST00000624727 2117 ntBASIC5.35□□□□□ -1.55
CCNFP41002 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNFP41002 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNFP41002 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNFP41002 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCNFP41002 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCNFP41002 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCNFP41002 RNY3P13-201ENST00000365542 102 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 MIR1302-11-201ENST00000408051 138 ntBASIC5.34□□□□□ -1.55
CCNFP41002 MIR1302-9-201ENST00000408365 138 ntBASIC5.34□□□□□ -1.55
CCNFP41002 MIR1302-10-201ENST00000408734 138 ntBASIC5.34□□□□□ -1.55
CCNFP41002 RNU2-15P-201ENST00000410692 191 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNFP41002 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.55
CCNFP41002 AC009161.1-201ENST00000417306 376 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC010733.1-201ENST00000451515 401 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AL121877.1-201ENST00000453704 622 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC023141.9-201ENST00000458734 412 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC092754.1-201ENST00000472975 479 ntBASIC5.34□□□□□ -1.55
CCNFP41002 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNFP41002 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNFP41002 TMEM248P1-201ENST00000510579 951 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNFP41002 AC016065.2-201ENST00000514530 444 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNFP41002 SCARNA16.4-201ENST00000516956 187 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC105029.1-201ENST00000520250 669 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNFP41002 PSMA2P1-201ENST00000526365 646 ntBASIC5.34□□□□□ -1.55
CCNFP41002 OR4P1P-201ENST00000530808 1136 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNFP41002 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNFP41002 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNFP41002 AC011611.1-201ENST00000552179 197 ntBASIC5.34□□□□□ -1.55
CCNFP41002 SETP2-201ENST00000553886 926 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC006349.1-201ENST00000555526 235 ntBASIC5.34□□□□□ -1.55
CCNFP41002 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNFP41002 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNFP41002 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNFP41002 AL161729.3-201ENST00000603533 673 ntBASIC5.34□□□□□ -1.55
CCNFP41002 AC007566.2-201ENST00000603642 413 ntBASIC5.34□□□□□ -1.55
CCNFP41002 MIR1302-2-201ENST00000607096 138 ntBASIC5.34□□□□□ -1.55
CCNFP41002 OR6R2P-201ENST00000609216 300 ntBASIC5.34□□□□□ -1.55
CCNFP41002 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CCNFP41002 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNFP41002 AC090971.4-201ENST00000560291 1800 ntBASIC5.34□□□□□ -1.55
CCNFP41002 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms