Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD12P35452 RNU6-1122P-201ENST00000384449 107 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 MIR659-201ENST00000384963 97 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 RPL23AP29-201ENST00000397284 453 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 PPIAP31-201ENST00000405422 495 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 U3.35-201ENST00000408405 208 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 RNA5SP317-201ENST00000410176 116 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 RNA5SP311-201ENST00000411290 116 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 RPL36AP36-201ENST00000418616 301 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD12P35452 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD12P35452 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD12P35452 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD12P35452 RPL36AP33-201ENST00000450395 310 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD12P35452 ZNF114P1-201ENST00000453500 292 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD12P35452 RPL18AP17-201ENST00000455326 198 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC078817.1-201ENST00000492623 435 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC146944.2-203ENST00000502493 354 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC108078.3-201ENST00000502633 489 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HOXD12P35452 AC023141.12-201ENST00000512399 199 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC139495.1-202ENST00000513164 354 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 RNA5SP315-201ENST00000516340 116 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 RNA5SP312-201ENST00000517068 116 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD12P35452 AC135001.1-201ENST00000544546 283 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXD12P35452 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXD12P35452 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD12P35452 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXD12P35452 AL355812.1-201ENST00000603215 216 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC245389.1-201ENST00000605141 529 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC069304.2-201ENST00000605154 435 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AC024560.3-201ENST00000608482 349 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AL391497.1-201ENST00000608671 547 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD12P35452 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD12P35452 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD12P35452 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD12P35452 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
HOXD12P35452 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD12P35452 AC117529.2-201ENST00000512159 2068 ntBASIC4.49□□□□□ -1.69
HOXD12P35452 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.48□□□□□ -1.69
HOXD12P35452 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD12P35452 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD12P35452 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HOXD12P35452 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 RNU1-130P-201ENST00000363930 160 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 RN7SKP280-201ENST00000364196 304 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 Y_RNA.302-201ENST00000364997 102 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 RNU1-13P-201ENST00000384499 162 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 Y_RNA.553-201ENST00000384670 102 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 MT-TC-201ENST00000387405 66 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AL121972.1-201ENST00000402023 252 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AL450338.1-201ENST00000407987 512 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AL031779.1-201ENST00000415663 330 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AL391219.1-201ENST00000422570 483 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AC093698.1-201ENST00000423843 571 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD12P35452 RPS3AP54-201ENST00000435535 734 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXD12P35452 MTND2P20-201ENST00000440805 661 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 Z95327.1-201ENST00000446082 482 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXD12P35452 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 HMGN2P21-201ENST00000447764 270 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD12P35452 SLC31A1P1-201ENST00000451221 567 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXD12P35452 AC109486.1-201ENST00000486833 374 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AP002812.1-201ENST00000495378 474 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 MTCYBP17-201ENST00000503579 789 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AC020593.1-201ENST00000507399 299 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD12P35452 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD12P35452 FTH1P9-201ENST00000513251 355 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD12P35452 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD12P35452 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD12P35452 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD12P35452 FKBP1BP1-201ENST00000553366 325 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD12P35452 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD12P35452 AC006362.1-201ENST00000567392 174 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AP000254.1-201ENST00000609934 520 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 AC004825.2-201ENST00000616634 455 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXD12P35452 AC079228.1-201ENST00000624774 1049 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXD12P35452 FAM91A3P-201ENST00000456826 2544 ntBASIC4.48□□□□□ -1.69
HOXD12P35452 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms