Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 Z77249.1-201ENST00000444622 1175 ntBASIC3.05□□□□□ -1.92
RPA3P35244 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.05□□□□□ -1.92
RPA3P35244 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.05□□□□□ -1.92
RPA3P35244 AC108157.1-201ENST00000510511 539 ntBASIC3.05□□□□□ -1.92
RPA3P35244 RPL7L1P13-201ENST00000511702 739 ntBASIC3.05□□□□□ -1.92
RPA3P35244 AC016065.2-201ENST00000514530 444 ntBASIC3.05□□□□□ -1.92
RPA3P35244 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
RPA3P35244 AP003717.3-201ENST00000544832 1180 ntBASIC3.05□□□□□ -1.92
RPA3P35244 SYF2P1-201ENST00000550658 413 ntBASIC3.05□□□□□ -1.92
RPA3P35244 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.05□□□□□ -1.92
RPA3P35244 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.05□□□□□ -1.92
RPA3P35244 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.05□□□□□ -1.92
RPA3P35244 AC012468.1-201ENST00000604888 430 ntBASIC3.05□□□□□ -1.92
RPA3P35244 AC096577.2-201ENST00000611455 153 ntBASIC3.05□□□□□ -1.92
RPA3P35244 AC099506.2-201ENST00000623074 221 ntBASIC3.05□□□□□ -1.92
RPA3P35244 AC018692.3-201ENST00000623929 123 ntBASIC3.05□□□□□ -1.92
RPA3P35244 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RPA3P35244 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
RPA3P35244 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.05□□□□□ -1.92
RPA3P35244 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RPA3P35244 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RPA3P35244 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RPA3P35244 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RPA3P35244 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.04□□□□□ -1.92
RPA3P35244 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RPA3P35244 TOMM22P1-201ENST00000418578 312 ntBASIC3.04□□□□□ -1.92
RPA3P35244 AC005517.2-201ENST00000424673 553 ntBASIC3.04□□□□□ -1.92
RPA3P35244 AC093151.1-201ENST00000427711 313 ntBASIC3.04□□□□□ -1.92
RPA3P35244 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.04□□□□□ -1.92
RPA3P35244 RPL21P112-201ENST00000434403 463 ntBASIC3.04□□□□□ -1.92
RPA3P35244 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.04□□□□□ -1.92
RPA3P35244 AL513343.1-201ENST00000451818 792 ntBASIC3.04□□□□□ -1.92
RPA3P35244 OR52A4P-203ENST00000498233 1014 ntBASIC3.04□□□□□ -1.92
RPA3P35244 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
RPA3P35244 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.04□□□□□ -1.92
RPA3P35244 RNU6-760P-201ENST00000516078 97 ntBASIC3.04□□□□□ -1.92
RPA3P35244 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPA3P35244 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.04□□□□□ -1.92
RPA3P35244 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.04□□□□□ -1.92
RPA3P35244 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.04□□□□□ -1.92
RPA3P35244 MIR3690-201ENST00000580266 75 ntBASIC3.04□□□□□ -1.92
RPA3P35244 AC090616.5-202ENST00000582111 297 ntBASIC3.04□□□□□ -1.92
RPA3P35244 CBX3P2-202ENST00000583365 535 ntBASIC3.04□□□□□ -1.92
RPA3P35244 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.04□□□□□ -1.92
RPA3P35244 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RPA3P35244 XIST_intron.1-201ENST00000619444 68 ntBASIC3.04□□□□□ -1.92
RPA3P35244 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.04□□□□□ -1.92
RPA3P35244 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RPA3P35244 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RPA3P35244 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
RPA3P35244 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.03□□□□□ -1.92
RPA3P35244 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPA3P35244 OR5BR1P-201ENST00000524992 1330 ntBASIC3.03□□□□□ -1.92
RPA3P35244 METTL21EP-201ENST00000298105 713 ntBASIC3.03□□□□□ -1.92
RPA3P35244 SNORD15B-201ENST00000384714 146 ntBASIC3.03□□□□□ -1.92
RPA3P35244 AP000567.1-201ENST00000406413 156 ntBASIC3.03□□□□□ -1.92
RPA3P35244 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.03□□□□□ -1.92
RPA3P35244 EI24P1-201ENST00000416584 867 ntBASIC3.03□□□□□ -1.92
RPA3P35244 KRR1P1-201ENST00000419430 803 ntBASIC3.03□□□□□ -1.92
RPA3P35244 UBE2V1P1-201ENST00000430836 445 ntBASIC3.03□□□□□ -1.92
RPA3P35244 UBE2V2P3-201ENST00000433562 437 ntBASIC3.03□□□□□ -1.92
RPA3P35244 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.03□□□□□ -1.92
RPA3P35244 AC097499.1-201ENST00000444277 208 ntBASIC3.03□□□□□ -1.92
RPA3P35244 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.03□□□□□ -1.92
RPA3P35244 AC092754.2-201ENST00000463506 460 ntBASIC3.03□□□□□ -1.92
RPA3P35244 RPS17P11-201ENST00000474297 293 ntBASIC3.03□□□□□ -1.92
RPA3P35244 RN7SL504P-201ENST00000494496 287 ntBASIC3.03□□□□□ -1.92
RPA3P35244 AC104115.2-201ENST00000523026 687 ntBASIC3.03□□□□□ -1.92
RPA3P35244 MTCYBP41-201ENST00000528913 1123 ntBASIC3.03□□□□□ -1.92
RPA3P35244 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.03□□□□□ -1.92
RPA3P35244 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPA3P35244 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.03□□□□□ -1.92
RPA3P35244 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
RPA3P35244 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.03□□□□□ -1.92
RPA3P35244 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.03□□□□□ -1.92
RPA3P35244 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.03□□□□□ -1.92
RPA3P35244 CR589904.2-201ENST00000612533 440 ntBASIC3.03□□□□□ -1.92
RPA3P35244 AC007318.2-201ENST00000620999 243 ntBASIC3.03□□□□□ -1.92
RPA3P35244 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.03□□□□□ -1.92
RPA3P35244 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.03□□□□□ -1.92
RPA3P35244 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.03□□□□□ -1.92
RPA3P35244 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
RPA3P35244 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPA3P35244 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RPA3P35244 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
RPA3P35244 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RPA3P35244 AC073325.2-201ENST00000339545 159 ntBASIC3.02□□□□□ -1.93
RPA3P35244 SNORA7.2-201ENST00000364446 145 ntBASIC3.02□□□□□ -1.93
RPA3P35244 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
RPA3P35244 SNORA7.4-201ENST00000384249 137 ntBASIC3.02□□□□□ -1.93
RPA3P35244 RNU6-40P-201ENST00000384254 107 ntBASIC3.02□□□□□ -1.93
RPA3P35244 SNORD67-201ENST00000390833 111 ntBASIC3.02□□□□□ -1.93
RPA3P35244 RNA5SP344-201ENST00000411081 104 ntBASIC3.02□□□□□ -1.93
RPA3P35244 VTA1P1-201ENST00000414044 866 ntBASIC3.02□□□□□ -1.93
RPA3P35244 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.02□□□□□ -1.93
RPA3P35244 AL451074.5-201ENST00000415894 435 ntBASIC3.02□□□□□ -1.93
RPA3P35244 NEK4P1-201ENST00000433383 879 ntBASIC3.02□□□□□ -1.93
RPA3P35244 AC011242.1-201ENST00000433596 1158 ntBASIC3.02□□□□□ -1.93
RPA3P35244 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.02□□□□□ -1.93
RPA3P35244 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms