Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH3P22223 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH3P22223 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH3P22223 AC022662.1-201ENST00000580252 331 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH3P22223 AC104662.1-201ENST00000604448 511 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AC022509.4-201ENST00000621404 572 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AL161637.1-201ENST00000622380 412 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AP002791.1-201ENST00000623291 381 ntBASIC3.85□□□□□ -1.79
CDH3P22223 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH3P22223 U6.98-201ENST00000637157 84 ntBASIC3.85□□□□□ -1.79
CDH3P22223 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH3P22223 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH3P22223 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH3P22223 MTCO1P24-201ENST00000515438 1558 ntBASIC3.85□□□□□ -1.79
CDH3P22223 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH3P22223 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 RNU6-83P-201ENST00000384568 112 ntBASIC3.84□□□□□ -1.79
CDH3P22223 MIR607-201ENST00000385241 96 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 EIF5P1-201ENST00000400019 1231 ntBASIC3.84□□□□□ -1.79
CDH3P22223 MTND4P13-201ENST00000402078 1023 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC009237.5-201ENST00000414271 501 ntBASIC3.84□□□□□ -1.79
CDH3P22223 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.84□□□□□ -1.79
CDH3P22223 CKS1BP5-201ENST00000434172 273 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC122718.1-201ENST00000439448 744 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH3P22223 AC239367.2-201ENST00000447309 705 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH3P22223 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 FAM133DP-201ENST00000464802 691 ntBASIC3.84□□□□□ -1.79
CDH3P22223 RN7SL271P-201ENST00000487601 295 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC021146.5-201ENST00000503544 545 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC098862.1-201ENST00000504991 413 ntBASIC3.84□□□□□ -1.79
CDH3P22223 BOLA3P3-201ENST00000505182 232 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH3P22223 RNU6-1225P-201ENST00000516336 65 ntBASIC3.84□□□□□ -1.79
CDH3P22223 RN7SKP31-201ENST00000516354 278 ntBASIC3.84□□□□□ -1.79
CDH3P22223 SNORA48.10-201ENST00000516965 160 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH3P22223 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH3P22223 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH3P22223 AC023538.1-201ENST00000534576 736 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH3P22223 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH3P22223 GTF2IP8-201ENST00000560687 584 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC093519.1-201ENST00000566109 298 ntBASIC3.84□□□□□ -1.79
CDH3P22223 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH3P22223 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 RN7SL703P-201ENST00000578485 302 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC245036.5-201ENST00000596330 847 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC091167.4-201ENST00000605079 184 ntBASIC3.84□□□□□ -1.79
CDH3P22223 HSPE1P14-201ENST00000605812 302 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH3P22223 AL355493.4-201ENST00000618530 292 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AL139089.1-201ENST00000620372 975 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 AC073348.1-201ENST00000623002 331 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AL512506.2-201ENST00000624472 458 ntBASIC3.84□□□□□ -1.79
CDH3P22223 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH3P22223 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH3P22223 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CDH3P22223 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH3P22223 AP002001.2-201ENST00000529025 1469 ntBASIC3.84□□□□□ -1.8
CDH3P22223 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.84□□□□□ -1.8
CDH3P22223 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH3P22223 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH3P22223 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CDH3P22223 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 LINC00561-201ENST00000565815 2738 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RNU6-251P-201ENST00000363235 104 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RNU5D-1-201ENST00000363299 116 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RNA5SP97-201ENST00000365006 84 ntBASIC3.83□□□□□ -1.8
CDH3P22223 Y_RNA.465-201ENST00000384293 102 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RNU6-921P-201ENST00000384361 107 ntBASIC3.83□□□□□ -1.8
CDH3P22223 AL121978.1-201ENST00000402778 359 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RPL23AP47-201ENST00000408017 460 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RN7SKP202-201ENST00000410439 330 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RPL7AP73-201ENST00000413490 353 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RPL31P2-201ENST00000413849 377 ntBASIC3.83□□□□□ -1.8
CDH3P22223 AL008987.1-201ENST00000415528 237 ntBASIC3.83□□□□□ -1.8
CDH3P22223 MTND2P16-201ENST00000419987 799 ntBASIC3.83□□□□□ -1.8
CDH3P22223 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH3P22223 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 RPL31P54-201ENST00000429803 370 ntBASIC3.83□□□□□ -1.8
CDH3P22223 USP9YP31-201ENST00000431405 881 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms