Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC126365.2-201ENST00000580630 379 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 MIR5187-201ENST00000583479 76 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC068620.3-201ENST00000602749 560 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC055876.5-201ENST00000605667 259 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 MIR8058-201ENST00000615737 89 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AL512427.1-201ENST00000618593 349 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AF117829.1-206ENST00000621883 3802 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC109454.4-201ENST00000623411 649 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC027287.1-201ENST00000553115 1453 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 RNU6-657P-201ENST00000383904 107 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AL035405.1-201ENST00000400795 710 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 MTHFD2P2-201ENST00000407725 247 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 RN7SKP156-201ENST00000410308 342 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC012497.1-201ENST00000429392 575 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 USP9YP31-201ENST00000431405 881 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 SLC31A1P1-201ENST00000451221 567 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 UBDP1-202ENST00000457888 382 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 HMGB1P25-201ENST00000468402 607 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 KLRA1P-201ENST00000503499 986 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC093853.1-201ENST00000515689 483 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 RNU6-27P-201ENST00000516146 107 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 MTCO1P49-201ENST00000523429 802 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 OR7E13P-201ENST00000526052 910 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 OR8I1P-201ENST00000529291 931 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC068339.2-201ENST00000534395 618 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AP000619.3-201ENST00000535634 1127 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC087897.1-201ENST00000550134 156 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AL389895.1-201ENST00000554127 252 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 SNORD84-203ENST00000584275 78 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AL445435.1-201ENST00000604232 665 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AP002802.2-201ENST00000605877 235 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC011816.2-201ENST00000607089 556 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AL356863.1-201ENST00000623378 1080 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 CYP3A51P-201ENST00000633513 256 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AL049780.3-201ENST00000624612 1583 ntBASIC3.75□□□□□ -1.81
HLA-DPA1P20036 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPA1P20036 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 AL136520.1-201ENST00000600311 1322 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 SUGT1P1-201ENST00000379514 476 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 RNU6-1074P-201ENST00000383995 104 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 SOD2P1-201ENST00000396543 562 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 AL590704.1-201ENST00000402856 794 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 RNU6ATAC-201ENST00000408749 126 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 SNORA57.3-201ENST00000411095 141 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 AC092447.6-201ENST00000414578 210 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 HMGB3P20-201ENST00000417997 600 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 AL139247.1-201ENST00000422768 325 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 DUTP6-201ENST00000425573 462 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 RABEPKP1-201ENST00000440529 1026 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 MTND2P19-201ENST00000449129 1012 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPA1P20036 SSXP4-201ENST00000451349 245 ntBASIC3.74□□□□□ -1.81
HLA-DPA1P20036 NANOGP10-201ENST00000453325 895 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms