Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 MIR148B-201ENST00000362252 99 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 SNORD56.3-201ENST00000363507 71 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 RSL24D1P1-201ENST00000404972 493 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 RSL24D1P6-201ENST00000426934 401 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 RPL7P2-201ENST00000427639 268 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 DPPA2P1-201ENST00000428060 556 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.01□□□□□ -1.93
UBCP0CG48 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 RABEPKP1-201ENST00000440529 1026 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC097262.1-201ENST00000452559 548 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 RPL21P8-201ENST00000465083 535 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 PRDX3P4-201ENST00000470828 747 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.01□□□□□ -1.93
UBCP0CG48 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.01□□□□□ -1.93
UBCP0CG48 HMGN2P13-201ENST00000476476 274 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC017015.1-201ENST00000477387 286 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 SETP12-201ENST00000514068 805 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC245166.1-201ENST00000521012 253 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC104027.1-201ENST00000521887 300 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.01□□□□□ -1.93
UBCP0CG48 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.01□□□□□ -1.93
UBCP0CG48 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.01□□□□□ -1.93
UBCP0CG48 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.01□□□□□ -1.93
UBCP0CG48 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.01□□□□□ -1.93
UBCP0CG48 AP001029.3-201ENST00000588063 596 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.01□□□□□ -1.93
UBCP0CG48 AC022916.3-201ENST00000592961 742 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC020914.6-201ENST00000594327 272 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AL391497.1-201ENST00000608671 547 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC083809.1-201ENST00000615051 472 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 AC003001.2-201ENST00000616294 831 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.01□□□□□ -1.93
UBCP0CG48 AC004972.1-201ENST00000623934 2209 ntBASIC3.01□□□□□ -1.93
UBCP0CG48 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBCP0CG48 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.01□□□□□ -1.93
UBCP0CG48 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
UBCP0CG48 AC244517.1-201ENST00000606030 2086 ntBASIC3□□□□□ -1.93
UBCP0CG48 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
UBCP0CG48 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3□□□□□ -1.93
UBCP0CG48 RNU6-650P-201ENST00000365658 111 ntBASIC3□□□□□ -1.93
UBCP0CG48 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3□□□□□ -1.93
UBCP0CG48 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3□□□□□ -1.93
UBCP0CG48 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3□□□□□ -1.93
UBCP0CG48 AL158050.1-201ENST00000416077 457 ntBASIC3□□□□□ -1.93
UBCP0CG48 AL356968.1-201ENST00000416622 474 ntBASIC3□□□□□ -1.93
UBCP0CG48 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3□□□□□ -1.93
UBCP0CG48 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3□□□□□ -1.93
UBCP0CG48 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3□□□□□ -1.93
UBCP0CG48 DUTP6-201ENST00000425573 462 ntBASIC3□□□□□ -1.93
UBCP0CG48 OFD1P12Y-201ENST00000427963 1207 ntBASIC3□□□□□ -1.93
UBCP0CG48 OFD1P13Y-201ENST00000431179 1232 ntBASIC3□□□□□ -1.93
UBCP0CG48 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3□□□□□ -1.93
UBCP0CG48 AC002542.1-201ENST00000440683 193 ntBASIC3□□□□□ -1.93
UBCP0CG48 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3□□□□□ -1.93
UBCP0CG48 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3□□□□□ -1.93
UBCP0CG48 AC009220.1-201ENST00000451614 275 ntBASIC3□□□□□ -1.93
UBCP0CG48 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3□□□□□ -1.93
UBCP0CG48 HMGB1P25-201ENST00000468402 607 ntBASIC3□□□□□ -1.93
UBCP0CG48 AC006483.1-201ENST00000487308 313 ntBASIC3□□□□□ -1.93
UBCP0CG48 RN7SL283P-201ENST00000489055 303 ntBASIC3□□□□□ -1.93
UBCP0CG48 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3□□□□□ -1.93
UBCP0CG48 PRELID3BP4-201ENST00000515476 571 ntBASIC3□□□□□ -1.93
UBCP0CG48 MIR2276-201ENST00000516886 89 ntBASIC3□□□□□ -1.93
UBCP0CG48 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3□□□□□ -1.93
UBCP0CG48 AP000916.1-201ENST00000533869 835 ntBASIC3□□□□□ -1.93
UBCP0CG48 LSM6P2-201ENST00000552208 177 ntBASIC3□□□□□ -1.93
UBCP0CG48 PARP1P2-201ENST00000556806 195 ntBASIC3□□□□□ -1.93
UBCP0CG48 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3□□□□□ -1.93
UBCP0CG48 AC007224.1-201ENST00000564410 144 ntBASIC3□□□□□ -1.93
UBCP0CG48 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3□□□□□ -1.93
UBCP0CG48 AC107982.3-201ENST00000584957 985 ntBASIC3□□□□□ -1.93
UBCP0CG48 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3□□□□□ -1.93
UBCP0CG48 AL020997.3-201ENST00000602843 359 ntBASIC3□□□□□ -1.93
UBCP0CG48 AC092474.3-201ENST00000603022 568 ntBASIC3□□□□□ -1.93
UBCP0CG48 AL133393.1-201ENST00000603277 287 ntBASIC3□□□□□ -1.93
UBCP0CG48 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3□□□□□ -1.93
UBCP0CG48 AC068831.7-201ENST00000616954 363 ntBASIC3□□□□□ -1.93
UBCP0CG48 U4.6-201ENST00000621618 127 ntBASIC3□□□□□ -1.93
UBCP0CG48 AL360181.4-201ENST00000621752 134 ntBASIC3□□□□□ -1.93
UBCP0CG48 AL118508.4-201ENST00000624142 1176 ntBASIC3□□□□□ -1.93
UBCP0CG48 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3□□□□□ -1.93
UBCP0CG48 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UBCP0CG48 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UBCP0CG48 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms