Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.31□□□□□ -1.72
MMP3P08254 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
MMP3P08254 SUGT1P1-201ENST00000379514 476 ntBASIC4.31□□□□□ -1.72
MMP3P08254 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
MMP3P08254 GSTM3P2-201ENST00000412746 530 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC009237.5-201ENST00000414271 501 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AL035423.1-201ENST00000420331 213 ntBASIC4.31□□□□□ -1.72
MMP3P08254 RPL31P54-201ENST00000429803 370 ntBASIC4.31□□□□□ -1.72
MMP3P08254 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MMP3P08254 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AL117351.1-201ENST00000438864 766 ntBASIC4.31□□□□□ -1.72
MMP3P08254 HMGB1P37-201ENST00000439613 609 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.31□□□□□ -1.72
MMP3P08254 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.31□□□□□ -1.72
MMP3P08254 EIF4A1P11-201ENST00000451239 222 ntBASIC4.31□□□□□ -1.72
MMP3P08254 OR6C5P-201ENST00000452388 923 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.31□□□□□ -1.72
MMP3P08254 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.31□□□□□ -1.72
MMP3P08254 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.31□□□□□ -1.72
MMP3P08254 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.31□□□□□ -1.72
MMP3P08254 XKRY-201ENST00000510392 1100 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC021146.3-201ENST00000511911 260 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.31□□□□□ -1.72
MMP3P08254 HNRNPKP5-201ENST00000515300 253 ntBASIC4.31□□□□□ -1.72
MMP3P08254 IGKV2-38-201ENST00000517443 247 ntBASIC4.31□□□□□ -1.72
MMP3P08254 IGKV2D-19-201ENST00000523346 262 ntBASIC4.31□□□□□ -1.72
MMP3P08254 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MMP3P08254 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.31□□□□□ -1.72
MMP3P08254 AC093519.1-201ENST00000566109 298 ntBASIC4.31□□□□□ -1.72
MMP3P08254 CYP4A43P-201ENST00000568156 121 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.31□□□□□ -1.72
MMP3P08254 AC011260.1-201ENST00000578420 472 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.31□□□□□ -1.72
MMP3P08254 SRGNP1-201ENST00000603392 451 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC018714.1-201ENST00000605028 208 ntBASIC4.31□□□□□ -1.72
MMP3P08254 HSPE1P14-201ENST00000605812 302 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AC006270.3-201ENST00000605967 1036 ntBASIC4.31□□□□□ -1.72
MMP3P08254 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.31□□□□□ -1.72
MMP3P08254 AL136981.2-201ENST00000617319 734 ntBASIC4.31□□□□□ -1.72
MMP3P08254 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.31□□□□□ -1.72
MMP3P08254 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
MMP3P08254 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
MMP3P08254 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MMP3P08254 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MMP3P08254 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.3□□□□□ -1.72
MMP3P08254 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.3□□□□□ -1.72
MMP3P08254 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MMP3P08254 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
MMP3P08254 RNA5SP391-201ENST00000363456 119 ntBASIC4.3□□□□□ -1.72
MMP3P08254 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
MMP3P08254 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.3□□□□□ -1.72
MMP3P08254 SNORD116-9-201ENST00000384000 95 ntBASIC4.3□□□□□ -1.72
MMP3P08254 SNORD116-3-201ENST00000384287 95 ntBASIC4.3□□□□□ -1.72
MMP3P08254 SNORD116-7-201ENST00000384404 95 ntBASIC4.3□□□□□ -1.72
MMP3P08254 SNORD116-5-201ENST00000384462 95 ntBASIC4.3□□□□□ -1.72
MMP3P08254 RNU6-253P-201ENST00000384730 105 ntBASIC4.3□□□□□ -1.72
MMP3P08254 ATP5F1P4-201ENST00000397288 746 ntBASIC4.3□□□□□ -1.72
MMP3P08254 HSPD1P16-201ENST00000402302 394 ntBASIC4.3□□□□□ -1.72
MMP3P08254 MTCO3P31-201ENST00000405526 789 ntBASIC4.3□□□□□ -1.72
MMP3P08254 SEPT2P1-201ENST00000419651 180 ntBASIC4.3□□□□□ -1.72
MMP3P08254 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.3□□□□□ -1.72
MMP3P08254 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.3□□□□□ -1.72
MMP3P08254 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MMP3P08254 HMGN2P31-201ENST00000432430 273 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.3□□□□□ -1.72
MMP3P08254 AC092013.1-201ENST00000438795 332 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AC073587.1-201ENST00000447093 876 ntBASIC4.3□□□□□ -1.72
MMP3P08254 PDSS1P2-201ENST00000449397 678 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.3□□□□□ -1.72
MMP3P08254 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.3□□□□□ -1.72
MMP3P08254 AL162388.1-201ENST00000450912 352 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.3□□□□□ -1.72
MMP3P08254 snoU13.24-201ENST00000458998 104 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AC092754.2-201ENST00000463506 460 ntBASIC4.3□□□□□ -1.72
MMP3P08254 HMGN1P11-201ENST00000508668 303 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.3□□□□□ -1.72
MMP3P08254 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.3□□□□□ -1.72
MMP3P08254 DUXAP2-201ENST00000519198 589 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AC022695.1-201ENST00000522089 237 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.3□□□□□ -1.72
MMP3P08254 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.3□□□□□ -1.72
MMP3P08254 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.3□□□□□ -1.72
MMP3P08254 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MMP3P08254 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.3□□□□□ -1.72
MMP3P08254 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.3□□□□□ -1.72
MMP3P08254 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.3□□□□□ -1.72
MMP3P08254 MIR5187-201ENST00000583479 76 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AC007179.3-201ENST00000604976 235 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.3□□□□□ -1.72
MMP3P08254 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.3□□□□□ -1.72
MMP3P08254 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MMP3P08254 AC091953.5-201ENST00000622919 233 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.3□□□□□ -1.72
MMP3P08254 AL773545.4-201ENST00000637262 310 ntBASIC4.3□□□□□ -1.72
MMP3P08254 AL513478.4-201ENST00000641636 310 ntBASIC4.3□□□□□ -1.72
MMP3P08254 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.3□□□□□ -1.72
MMP3P08254 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MMP3P08254 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
MMP3P08254 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms