Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM3P06753 AC104472.2-201ENST00000469035 601 ntBASIC3.36□□□□□ -1.87
TPM3P06753 RPL9P33-201ENST00000484311 566 ntBASIC3.36□□□□□ -1.87
TPM3P06753 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM3P06753 TRMT10BP1-201ENST00000519377 943 ntBASIC3.36□□□□□ -1.87
TPM3P06753 OR8I1P-201ENST00000529291 931 ntBASIC3.36□□□□□ -1.87
TPM3P06753 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM3P06753 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM3P06753 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.36□□□□□ -1.87
TPM3P06753 AC099506.2-201ENST00000623074 221 ntBASIC3.36□□□□□ -1.87
TPM3P06753 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM3P06753 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TPM3P06753 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TPM3P06753 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.35□□□□□ -1.87
TPM3P06753 MTATP6P31-201ENST00000406985 692 ntBASIC3.35□□□□□ -1.87
TPM3P06753 RAB9AP3-201ENST00000412737 573 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
TPM3P06753 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.35□□□□□ -1.87
TPM3P06753 HMGB1P48-201ENST00000446155 598 ntBASIC3.35□□□□□ -1.87
TPM3P06753 RAB9AP1-201ENST00000449393 573 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AC008571.1-201ENST00000467232 300 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AC104689.1-201ENST00000473356 768 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.35□□□□□ -1.87
TPM3P06753 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM3P06753 ELOCP31-201ENST00000540463 467 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM3P06753 POLR2KP1-201ENST00000553226 168 ntBASIC3.35□□□□□ -1.87
TPM3P06753 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
TPM3P06753 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.35□□□□□ -1.87
TPM3P06753 ZNF415P1-201ENST00000582279 1166 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AC091057.2-201ENST00000602594 792 ntBASIC3.35□□□□□ -1.87
TPM3P06753 PRELID3BP8-201ENST00000604148 295 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AC090115.4-201ENST00000609970 188 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AC138932.5-201ENST00000617759 563 ntBASIC3.35□□□□□ -1.87
TPM3P06753 MIR622-201ENST00000638396 96 ntBASIC3.35□□□□□ -1.87
TPM3P06753 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TPM3P06753 ASNSP3-201ENST00000451989 1306 ntBASIC3.35□□□□□ -1.87
TPM3P06753 Z82195.2-201ENST00000612348 18351 ntBASIC3.35□□□□□ -1.87
TPM3P06753 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TPM3P06753 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TPM3P06753 GABRG2-229ENST00000641017 3628 ntBASIC3.34□□□□□ -1.87
TPM3P06753 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.34□□□□□ -1.87
TPM3P06753 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.34□□□□□ -1.87
TPM3P06753 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TPM3P06753 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.34□□□□□ -1.87
TPM3P06753 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.34□□□□□ -1.87
TPM3P06753 RNA5SP124-201ENST00000362739 110 ntBASIC3.34□□□□□ -1.87
TPM3P06753 DEFB109C-201ENST00000382575 264 ntBASIC3.34□□□□□ -1.87
TPM3P06753 DEFB109B-201ENST00000382656 264 ntBASIC3.34□□□□□ -1.87
TPM3P06753 RAP1BP1-201ENST00000412709 553 ntBASIC3.34□□□□□ -1.87
TPM3P06753 MTCYBP24-201ENST00000420387 1106 ntBASIC3.34□□□□□ -1.87
TPM3P06753 RPF2P1-201ENST00000424137 906 ntBASIC3.34□□□□□ -1.87
TPM3P06753 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM3P06753 RPL23AP58-201ENST00000440453 469 ntBASIC3.34□□□□□ -1.87
TPM3P06753 HMGB1P5-202ENST00000451497 985 ntBASIC3.34□□□□□ -1.87
TPM3P06753 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM3P06753 DYNLL1P6-201ENST00000503440 264 ntBASIC3.34□□□□□ -1.87
TPM3P06753 AC026403.1-201ENST00000518938 295 ntBASIC3.34□□□□□ -1.87
TPM3P06753 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.34□□□□□ -1.87
TPM3P06753 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TPM3P06753 AC107016.2-201ENST00000547968 190 ntBASIC3.34□□□□□ -1.87
TPM3P06753 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.34□□□□□ -1.87
TPM3P06753 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM3P06753 CKS1BP3-201ENST00000600888 237 ntBASIC3.34□□□□□ -1.87
TPM3P06753 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM3P06753 AC002076.2-201ENST00000617362 122 ntBASIC3.34□□□□□ -1.87
TPM3P06753 AC006249.1-201ENST00000621223 471 ntBASIC3.34□□□□□ -1.87
TPM3P06753 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TPM3P06753 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
TPM3P06753 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TPM3P06753 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TPM3P06753 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.33□□□□□ -1.88
TPM3P06753 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TPM3P06753 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM3P06753 AC063979.1-201ENST00000415539 377 ntBASIC3.33□□□□□ -1.88
TPM3P06753 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM3P06753 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM3P06753 AL445528.1-201ENST00000426330 420 ntBASIC3.33□□□□□ -1.88
TPM3P06753 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM3P06753 AL133547.1-201ENST00000448546 220 ntBASIC3.33□□□□□ -1.88
TPM3P06753 RN7SL297P-201ENST00000483161 293 ntBASIC3.33□□□□□ -1.88
TPM3P06753 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM3P06753 PCNAP1-201ENST00000505363 709 ntBASIC3.33□□□□□ -1.88
TPM3P06753 MTCYBP37-201ENST00000510642 1133 ntBASIC3.33□□□□□ -1.88
TPM3P06753 AC016065.2-201ENST00000514530 444 ntBASIC3.33□□□□□ -1.88
TPM3P06753 AC016550.3-201ENST00000515706 767 ntBASIC3.33□□□□□ -1.88
TPM3P06753 AC008562.1-201ENST00000521763 330 ntBASIC3.33□□□□□ -1.88
TPM3P06753 COX6B1P6-201ENST00000522347 255 ntBASIC3.33□□□□□ -1.88
TPM3P06753 AC104115.2-201ENST00000523026 687 ntBASIC3.33□□□□□ -1.88
TPM3P06753 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.33□□□□□ -1.88
TPM3P06753 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.33□□□□□ -1.88
TPM3P06753 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM3P06753 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM3P06753 RPL21P12-201ENST00000559810 515 ntBASIC3.33□□□□□ -1.88
TPM3P06753 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.33□□□□□ -1.88
TPM3P06753 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM3P06753 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.33□□□□□ -1.88
TPM3P06753 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM3P06753 AC105227.2-201ENST00000615075 605 ntBASIC3.33□□□□□ -1.88
TPM3P06753 AC022509.4-201ENST00000621404 572 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms