Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC023158.1-201ENST00000561632 1025 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC024153.1-201ENST00000603103 365 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AL137246.1-201ENST00000607072 977 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC093732.2-201ENST00000607950 274 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC243756.2-201ENST00000618406 463 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC010338.1-201ENST00000621823 717 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC092593.1-201ENST00000515413 1815 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AL672296.1-201ENST00000427780 2158 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 RNU6-891P-201ENST00000384280 111 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 MIR591-201ENST00000385290 95 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 SNORA48.8-201ENST00000391324 134 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AC008065.1-201ENST00000428525 348 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 SETP5-201ENST00000437270 562 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 SLC31A1P1-201ENST00000451221 567 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 RPL37P3-201ENST00000456825 293 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AC003982.1-202ENST00000469928 248 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AC091826.1-201ENST00000514065 313 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 SCARNA13-201ENST00000516672 275 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 CYCSP39-201ENST00000565821 309 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 PCNAP1-202ENST00000595299 752 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 ZNF807-201ENST00000328088 1707 ntBASIC2.87□□□□□ -1.95
HLA-DQB2P05538 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQB2P05538 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 GNG5P1-201ENST00000255500 204 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 HMGB1P13-201ENST00000406019 642 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC012498.1-201ENST00000424037 437 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AL606490.7-201ENST00000433136 191 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 VDAC1P3-201ENST00000434069 851 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC006994.1-201ENST00000438212 839 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AL135938.1-201ENST00000443141 297 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC092754.2-201ENST00000463506 460 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC126121.1-201ENST00000482313 553 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AP001025.2-201ENST00000490908 477 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC078918.1-201ENST00000498515 228 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC111000.2-201ENST00000507775 550 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AL451007.1-201ENST00000595491 289 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 Z99129.2-201ENST00000619967 314 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 AC006111.3-201ENST00000622137 383 ntBASIC2.86□□□□□ -1.95
HLA-DQB2P05538 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQB2P05538 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 RNA5SP391-201ENST00000363456 119 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AL592148.1-201ENST00000413568 445 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 XKRYP4-201ENST00000414395 483 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 NDUFB4P5-201ENST00000415445 361 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 SDCBPP3-201ENST00000419629 891 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 MTND2P16-201ENST00000419987 799 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 RPL7P44-201ENST00000424827 742 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AL121578.1-201ENST00000428051 892 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 RPL21P40-201ENST00000428586 483 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 RPS20P5-201ENST00000434808 360 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 RPL23AP83-201ENST00000434984 473 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AL513043.1-201ENST00000439124 535 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 XKRYP5-201ENST00000449659 483 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 SETP6-201ENST00000479329 568 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms