Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 FTH1P9-201ENST00000513251 355 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 RN7SKP157-201ENST00000516174 282 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 RNU4-60P-201ENST00000517239 135 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 OR4R3P-201ENST00000525084 838 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 NIFKP8-201ENST00000560500 874 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC093510.2-201ENST00000562820 896 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC055876.1-202ENST00000567053 138 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC006254.3-201ENST00000603353 884 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL121594.5-201ENST00000631724 573 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL590396.4-201ENST00000636779 956 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC093831.2-201ENST00000624393 3427 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 RNA5SP197-201ENST00000363357 119 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 RNU6-353P-201ENST00000364266 108 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 RNU6-356P-201ENST00000384140 107 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 MIR490-201ENST00000384865 128 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 RN7SKP27-201ENST00000410684 333 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC245054.2-201ENST00000415639 319 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC245052.5-201ENST00000416320 649 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 SDCBPP3-201ENST00000419629 891 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 PSMA2P3-201ENST00000429685 675 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 OR51B8P-201ENST00000449892 769 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 RPS20P32-201ENST00000456044 356 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 RN7SL75P-201ENST00000461926 281 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC087879.1-201ENST00000474343 374 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AP002812.1-201ENST00000495378 474 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 IGKV2-26-201ENST00000518305 343 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC007458.1-201ENST00000542812 373 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 MIR4429-201ENST00000580105 73 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC103710.3-201ENST00000608157 948 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC016542.1-201ENST00000608259 493 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC013468.1-201ENST00000608680 598 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AP004247.3-201ENST00000608682 624 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC091903.1-201ENST00000624322 454 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 MIR4496-201ENST00000635896 61 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 MTND5P24-201ENST00000438892 1767 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC093908.1-201ENST00000623125 8092 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AL353743.1-202ENST00000431724 1695 ntBASIC2.92□□□□□ -1.94
HLA-DPB1P04440 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DPB1P04440 AC092326.2-201ENST00000624772 1561 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 RNA5SP50-201ENST00000363731 107 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 U6.112-201ENST00000384129 70 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 RNU6-207P-201ENST00000384137 107 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 MIR670-201ENST00000390142 98 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 SNORA48.7-201ENST00000391302 135 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC073264.1-201ENST00000411508 416 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC069218.2-201ENST00000411665 344 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 BX323014.1-201ENST00000412876 237 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 MTATP6P19-201ENST00000413797 659 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 NDUFB4P5-201ENST00000415445 361 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 TAF13P2-201ENST00000416876 286 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms