Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.2□□□□□ -1.9
APOEP02649 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.2□□□□□ -1.9
APOEP02649 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.2□□□□□ -1.9
APOEP02649 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.2□□□□□ -1.9
APOEP02649 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.2□□□□□ -1.9
APOEP02649 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
APOEP02649 MIR4325-201ENST00000583049 90 ntBASIC3.2□□□□□ -1.9
APOEP02649 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.2□□□□□ -1.9
APOEP02649 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.2□□□□□ -1.9
APOEP02649 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOEP02649 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.2□□□□□ -1.9
APOEP02649 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOEP02649 AC093831.2-201ENST00000624393 3427 ntBASIC3.2□□□□□ -1.9
APOEP02649 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.2□□□□□ -1.9
APOEP02649 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOEP02649 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.19□□□□□ -1.9
APOEP02649 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
APOEP02649 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOEP02649 AL138885.1-201ENST00000405921 675 ntBASIC3.19□□□□□ -1.9
APOEP02649 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
APOEP02649 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.19□□□□□ -1.9
APOEP02649 AC105402.1-201ENST00000413336 545 ntBASIC3.19□□□□□ -1.9
APOEP02649 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.19□□□□□ -1.9
APOEP02649 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
APOEP02649 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOEP02649 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.19□□□□□ -1.9
APOEP02649 HMGB1P12-201ENST00000438594 598 ntBASIC3.19□□□□□ -1.9
APOEP02649 ARL5AP3-201ENST00000439327 386 ntBASIC3.19□□□□□ -1.9
APOEP02649 AC023512.1-201ENST00000444513 499 ntBASIC3.19□□□□□ -1.9
APOEP02649 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOEP02649 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.19□□□□□ -1.9
APOEP02649 AC096992.1-201ENST00000459808 709 ntBASIC3.19□□□□□ -1.9
APOEP02649 AC146507.1-201ENST00000468335 354 ntBASIC3.19□□□□□ -1.9
APOEP02649 RPS4XP13-201ENST00000483219 789 ntBASIC3.19□□□□□ -1.9
APOEP02649 AC108120.2-201ENST00000512973 294 ntBASIC3.19□□□□□ -1.9
APOEP02649 AC008885.1-201ENST00000514930 301 ntBASIC3.19□□□□□ -1.9
APOEP02649 RNA5SP341-201ENST00000516261 117 ntBASIC3.19□□□□□ -1.9
APOEP02649 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.19□□□□□ -1.9
APOEP02649 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.19□□□□□ -1.9
APOEP02649 OR8L1P-201ENST00000534005 955 ntBASIC3.19□□□□□ -1.9
APOEP02649 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.19□□□□□ -1.9
APOEP02649 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.19□□□□□ -1.9
APOEP02649 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.19□□□□□ -1.9
APOEP02649 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
APOEP02649 AL392112.1-201ENST00000605115 829 ntBASIC3.19□□□□□ -1.9
APOEP02649 AP001002.2-201ENST00000625137 386 ntBASIC3.19□□□□□ -1.9
APOEP02649 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.19□□□□□ -1.9
APOEP02649 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOEP02649 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.19□□□□□ -1.9
APOEP02649 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
APOEP02649 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
APOEP02649 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
APOEP02649 MTND4P34-201ENST00000572715 1371 ntBASIC3.18□□□□□ -1.9
APOEP02649 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.18□□□□□ -1.9
APOEP02649 MIR22-201ENST00000362190 85 ntBASIC3.18□□□□□ -1.9
APOEP02649 SNORA71.1-201ENST00000364523 117 ntBASIC3.18□□□□□ -1.9
APOEP02649 SNORA26.7-201ENST00000391288 122 ntBASIC3.18□□□□□ -1.9
APOEP02649 AC234782.4-201ENST00000417646 1048 ntBASIC3.18□□□□□ -1.9
APOEP02649 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.18□□□□□ -1.9
APOEP02649 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.18□□□□□ -1.9
APOEP02649 RPL23AP33-201ENST00000442301 452 ntBASIC3.18□□□□□ -1.9
APOEP02649 COX6CP2-201ENST00000444980 225 ntBASIC3.18□□□□□ -1.9
APOEP02649 RPL29P29-201ENST00000448725 423 ntBASIC3.18□□□□□ -1.9
APOEP02649 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.18□□□□□ -1.9
APOEP02649 AC068724.1-201ENST00000487100 792 ntBASIC3.18□□□□□ -1.9
APOEP02649 RPL23AP55-201ENST00000498163 452 ntBASIC3.18□□□□□ -1.9
APOEP02649 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.18□□□□□ -1.9
APOEP02649 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
APOEP02649 RN7SKP277-201ENST00000516895 283 ntBASIC3.18□□□□□ -1.9
APOEP02649 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.18□□□□□ -1.9
APOEP02649 PSMA2P1-201ENST00000526365 646 ntBASIC3.18□□□□□ -1.9
APOEP02649 MIR3200-201ENST00000580767 85 ntBASIC3.18□□□□□ -1.9
APOEP02649 ZNF92P3-201ENST00000596594 954 ntBASIC3.18□□□□□ -1.9
APOEP02649 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
APOEP02649 YWHAQP7-201ENST00000603536 658 ntBASIC3.18□□□□□ -1.9
APOEP02649 BNIP3P11-201ENST00000603878 563 ntBASIC3.18□□□□□ -1.9
APOEP02649 OR2BH1P-201ENST00000608850 864 ntBASIC3.18□□□□□ -1.9
APOEP02649 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
APOEP02649 AC103988.1-201ENST00000566382 2177 ntBASIC3.18□□□□□ -1.9
APOEP02649 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.18□□□□□ -1.9
APOEP02649 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOEP02649 RNU6-600P-201ENST00000362524 99 ntBASIC3.17□□□□□ -1.9
APOEP02649 SNORA51.4-201ENST00000364993 124 ntBASIC3.17□□□□□ -1.9
APOEP02649 DNAJC19P6-201ENST00000401853 280 ntBASIC3.17□□□□□ -1.9
APOEP02649 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.17□□□□□ -1.9
APOEP02649 RNU2-21P-201ENST00000410368 188 ntBASIC3.17□□□□□ -1.9
APOEP02649 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOEP02649 RPL21P40-201ENST00000428586 483 ntBASIC3.17□□□□□ -1.9
APOEP02649 AC127537.2-201ENST00000439258 465 ntBASIC3.17□□□□□ -1.9
APOEP02649 CYCSP32-201ENST00000440548 321 ntBASIC3.17□□□□□ -1.9
APOEP02649 TPTE2P6-202ENST00000445572 1007 ntBASIC3.17□□□□□ -1.9
APOEP02649 HMGB1P5-202ENST00000451497 985 ntBASIC3.17□□□□□ -1.9
APOEP02649 RPL37P3-201ENST00000456825 293 ntBASIC3.17□□□□□ -1.9
APOEP02649 RPL31P13-201ENST00000484151 370 ntBASIC3.17□□□□□ -1.9
APOEP02649 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.17□□□□□ -1.9
APOEP02649 AC117525.1-201ENST00000515228 503 ntBASIC3.17□□□□□ -1.9
APOEP02649 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.17□□□□□ -1.9
APOEP02649 H3F3AP1-201ENST00000559984 334 ntBASIC3.17□□□□□ -1.9
APOEP02649 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.17□□□□□ -1.9
APOEP02649 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms