Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.42□□□□□ -2.02
SPTA1P02549 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.42□□□□□ -2.02
SPTA1P02549 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.42□□□□□ -2.02
SPTA1P02549 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.42□□□□□ -2.02
SPTA1P02549 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SPTA1P02549 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SPTA1P02549 SNORD62.1-201ENST00000362541 86 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 RPLP0P7-201ENST00000416050 667 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 AC009963.1-201ENST00000417265 157 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.41□□□□□ -2.02
SPTA1P02549 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.41□□□□□ -2.02
SPTA1P02549 FAR1P1-201ENST00000427163 934 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 HMGB3P11-201ENST00000440127 604 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 SRIP1-201ENST00000489235 288 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SPTA1P02549 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SPTA1P02549 FABP5P12-201ENST00000515543 389 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC2.41□□□□□ -2.02
SPTA1P02549 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC2.41□□□□□ -2.02
SPTA1P02549 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.41□□□□□ -2.02
SPTA1P02549 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SPTA1P02549 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.41□□□□□ -2.02
SPTA1P02549 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.41□□□□□ -2.02
SPTA1P02549 DDX18P3-201ENST00000404856 2007 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 U3.11-201ENST00000364476 212 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 SNORA17.3-201ENST00000391159 129 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 RPL7P8-201ENST00000411964 730 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 AC245054.2-201ENST00000415639 319 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.41□□□□□ -2.02
SPTA1P02549 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SPTA1P02549 AP003102.1-201ENST00000525638 661 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.41□□□□□ -2.02
SPTA1P02549 AC243972.3-201ENST00000539655 198 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 ZNF861P-201ENST00000588126 639 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 AL360085.1-201ENST00000604713 532 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
SPTA1P02549 AC073869.7-201ENST00000640874 297 ntBASIC2.41□□□□□ -2.02
SPTA1P02549 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SPTA1P02549 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.41□□□□□ -2.02
SPTA1P02549 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SPTA1P02549 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SPTA1P02549 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SPTA1P02549 RNA5SP107-201ENST00000411358 122 ntBASIC2.4□□□□□ -2.02
SPTA1P02549 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.4□□□□□ -2.02
SPTA1P02549 RPL23AP22-201ENST00000437556 453 ntBASIC2.4□□□□□ -2.02
SPTA1P02549 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.4□□□□□ -2.02
SPTA1P02549 OR10D4P-201ENST00000525892 951 ntBASIC2.4□□□□□ -2.02
SPTA1P02549 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.4□□□□□ -2.02
SPTA1P02549 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SPTA1P02549 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SPTA1P02549 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.4□□□□□ -2.03
SPTA1P02549 BX005019.1-201ENST00000561881 1810 ntBASIC2.4□□□□□ -2.03
SPTA1P02549 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.4□□□□□ -2.03
SPTA1P02549 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SPTA1P02549 RPS26P40-201ENST00000435209 294 ntBASIC2.4□□□□□ -2.03
SPTA1P02549 AC006539.3-201ENST00000454258 129 ntBASIC2.4□□□□□ -2.03
SPTA1P02549 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SPTA1P02549 AC004520.1-201ENST00000608362 1413 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SPTA1P02549 RNU1-112P-201ENST00000364401 164 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SPTA1P02549 AC234781.5-201ENST00000508429 271 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.39□□□□□ -2.03
SPTA1P02549 AC007424.1-203ENST00000554613 687 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 AC022884.3-201ENST00000579571 248 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 AC010928.3-201ENST00000587712 541 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SPTA1P02549 AP006437.1-201ENST00000641440 3685 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.39□□□□□ -2.03
SPTA1P02549 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.39□□□□□ -2.03
SPTA1P02549 MORF4L1P6-201ENST00000418771 268 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 AC006960.1-201ENST00000419980 153 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.39□□□□□ -2.03
SPTA1P02549 AC112220.1-201ENST00000434628 355 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.39□□□□□ -2.03
SPTA1P02549 AC003982.1-202ENST00000469928 248 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 ARL2BPP6-201ENST00000512757 439 ntBASIC2.39□□□□□ -2.03
SPTA1P02549 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.39□□□□□ -2.03
SPTA1P02549 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SPTA1P02549 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.39□□□□□ -2.03
SPTA1P02549 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SPTA1P02549 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
SPTA1P02549 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.38□□□□□ -2.03
SPTA1P02549 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.38□□□□□ -2.03
SPTA1P02549 AC012020.1-201ENST00000624541 1728 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SPTA1P02549 MIR518C-201ENST00000384822 101 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 SNORA26.9-201ENST00000391322 122 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 AL356057.3-201ENST00000402607 340 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.38□□□□□ -2.03
SPTA1P02549 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.38□□□□□ -2.03
SPTA1P02549 NPM1P49-201ENST00000448027 714 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.38□□□□□ -2.03
SPTA1P02549 AC090525.1-201ENST00000479116 478 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.38□□□□□ -2.03
SPTA1P02549 ELOCP31-201ENST00000540463 467 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.38□□□□□ -2.03
SPTA1P02549 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
SPTA1P02549 AC022069.1-201ENST00000582910 658 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms