Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.86□□□□□ -1.79
COL2A1P02458 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 MIR4738-201ENST00000579134 87 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AL133507.1-201ENST00000605269 557 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AL158042.1-201ENST00000605338 460 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 OR2AS2P-201ENST00000606902 342 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC004492.1-201ENST00000607036 742 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 AC092106.3-201ENST00000611308 722 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC005332.10-201ENST00000612725 619 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.86□□□□□ -1.79
COL2A1P02458 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 ZNF826P-207ENST00000622273 1910 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.85□□□□□ -1.79
COL2A1P02458 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
COL2A1P02458 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 MTND4P34-201ENST00000572715 1371 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL2A1P02458 AL603865.2-201ENST00000401679 213 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.85□□□□□ -1.79
COL2A1P02458 RNU6-648P-201ENST00000410190 107 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 RPL22P18-201ENST00000417197 377 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.85□□□□□ -1.79
COL2A1P02458 PTP4A1P7-201ENST00000423476 514 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.85□□□□□ -1.79
COL2A1P02458 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 AC093422.3-201ENST00000428506 305 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 ZNF965P-201ENST00000432501 817 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.85□□□□□ -1.79
COL2A1P02458 MTND1P29-201ENST00000448112 647 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AL133217.1-201ENST00000450980 425 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 ELOCP23-201ENST00000452014 332 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 HMGB1P26-201ENST00000452520 628 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 RPL21P18-201ENST00000469899 480 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC093663.2-201ENST00000484625 313 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 RPL7P47-201ENST00000497299 556 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC091951.3-201ENST00000504093 246 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.85□□□□□ -1.79
COL2A1P02458 AC113420.1-201ENST00000507903 571 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC112518.2-201ENST00000508565 425 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC103833.1-201ENST00000517442 172 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.85□□□□□ -1.79
COL2A1P02458 KCTD9P6-201ENST00000522306 950 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.85□□□□□ -1.79
COL2A1P02458 AC134698.4-201ENST00000523451 826 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.85□□□□□ -1.79
COL2A1P02458 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 CYP2C60P-201ENST00000566088 139 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.85□□□□□ -1.79
COL2A1P02458 AL590240.3-201ENST00000621416 943 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AP002782.1-201ENST00000623107 614 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 AC098679.5-201ENST00000624394 571 ntBASIC3.85□□□□□ -1.79
COL2A1P02458 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.79
COL2A1P02458 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL2A1P02458 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL2A1P02458 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL2A1P02458 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL2A1P02458 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.84□□□□□ -1.79
COL2A1P02458 CR382285.2-201ENST00000624662 1495 ntBASIC3.84□□□□□ -1.79
COL2A1P02458 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL2A1P02458 AP000526.1-201ENST00000603308 1388 ntBASIC3.84□□□□□ -1.79
COL2A1P02458 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
COL2A1P02458 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 SNORA54-201ENST00000384281 123 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 ARF4P3-201ENST00000397387 509 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 SFR1P1-201ENST00000403720 688 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 SNORA79B-201ENST00000410557 148 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 AL445183.3-201ENST00000414168 502 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 SEPT2P1-201ENST00000419651 180 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 RPL23AP69-201ENST00000431134 458 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 MTCYBP29-201ENST00000436327 1006 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.84□□□□□ -1.8
COL2A1P02458 MTND2P4-201ENST00000445034 1004 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 AC004022.1-201ENST00000447766 1066 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL2A1P02458 DNAJC19P8-201ENST00000452887 259 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 AC004924.1-201ENST00000480160 781 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL2A1P02458 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.84□□□□□ -1.8
COL2A1P02458 PCBP2P3-201ENST00000509726 843 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 HMGB1P47-201ENST00000511281 589 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.84□□□□□ -1.8
COL2A1P02458 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.84□□□□□ -1.8
COL2A1P02458 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.84□□□□□ -1.8
COL2A1P02458 COX6B1P6-201ENST00000522347 255 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 AC015917.1-201ENST00000579654 510 ntBASIC3.84□□□□□ -1.8
COL2A1P02458 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms