Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
UPK1BO75841 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.77□□□□□ -1.97
UPK1BO75841 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1BO75841 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1BO75841 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1BO75841 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1BO75841 MIR16-2-201ENST00000362117 81 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 MIR649-201ENST00000384843 97 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 SNORD65C-201ENST00000390962 71 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 MTND4P13-201ENST00000402078 1023 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 YPEL5P1-201ENST00000419731 367 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 AC246680.2-201ENST00000422106 389 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1BO75841 AC023141.6-201ENST00000429418 337 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 RPS29P6-201ENST00000438196 145 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 RPL7P55-201ENST00000450522 746 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1BO75841 AC104308.1-201ENST00000454621 333 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1BO75841 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1BO75841 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1BO75841 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1BO75841 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.76□□□□□ -1.97
UPK1BO75841 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1BO75841 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1BO75841 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 AC074051.3-201ENST00000570238 358 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 RN7SL753P-201ENST00000581238 290 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 MIR4436B2-201ENST00000581415 91 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 MIR4436B1-201ENST00000583272 91 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.76□□□□□ -1.97
UPK1BO75841 AC006504.3-201ENST00000586818 523 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC2.76□□□□□ -1.97
UPK1BO75841 AL109653.1-201ENST00000603091 248 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1BO75841 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1BO75841 AP004289.2-201ENST00000444413 1457 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1BO75841 AL355596.1-201ENST00000565399 3996 ntBASIC2.76□□□□□ -1.97
UPK1BO75841 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
UPK1BO75841 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1BO75841 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1BO75841 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1BO75841 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK1BO75841 RNU6-50P-201ENST00000362356 103 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 SNORD9-201ENST00000362566 104 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1BO75841 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
UPK1BO75841 RN7SKP111-201ENST00000410349 271 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 AL356095.1-201ENST00000417217 199 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 HIGD1AP11-201ENST00000438361 280 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.75□□□□□ -1.97
UPK1BO75841 ATP5C1P1-201ENST00000441945 895 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 HMGN3P1-201ENST00000453847 193 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 NAP1L1P3-201ENST00000462291 880 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 ACTR3P3-201ENST00000480448 893 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 RN7SL633P-201ENST00000488974 297 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 MTND3P24-201ENST00000506306 329 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 RNU6-826P-201ENST00000516827 104 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 AC124293.1-201ENST00000530034 493 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 OR8K4P-201ENST00000534608 872 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 AL121603.1-201ENST00000553815 142 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1BO75841 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK1BO75841 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK1BO75841 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK1BO75841 AC091953.3-201ENST00000623220 236 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK1BO75841 AC127502.3-201ENST00000636170 1206 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1BO75841 AC004925.1-201ENST00000624256 2706 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 AC110774.1-201ENST00000623567 2018 ntBASIC2.75□□□□□ -1.97
UPK1BO75841 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
UPK1BO75841 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UPK1BO75841 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPK1BO75841 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms